Document of dataset 8921

Dataset record

Type
Dataset
title in English
ARMS-MBON data on long-term monitoring of hard-bottom communities: ITS results from 2020-2022
Abstract in English

ARMS-MBON is a network of more than 25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) settlement units in the vicinity of marine stations and Long-term Ecological Research sites in European coastal waters and Ant/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the lifeforms that settled on them. The collected data are published (see the related datasets and GitHub links listed in this record) and the omics data analysed. 

In this record we include the outputs of our analysis of the ITS data from the 2020-2022 campaign. The analysis used the PEMA bioinformatics software, and the resulting taxonomics inventory has been turned into DwC format. In addition, all the PEMA inputs and outputs can be found on the ARMS-MBON GitHub site (see links in this record), and the subset of the sampling data to which these 18S results are linked can also be found on the ARMS-MBON GitHub site.

Contactpoint
Email
katrina.exter@vliz.be
License
https://spdx.org/licenses/CC-BY-4.0.html
bibliographicCitation
Pagnier J.; Allcock L.; Cancio I.; Chatzinikolaou E.; Chatzigeorgiou G.; Chrismas NAM.; Costantini F.; Dailianis T.; Deneudt K.; Diaz de Cerio, O.; Digenis M.; Exter K.; GerovasileiouV.; , González Fernández J.; Kauppi L.; Keklikoglou K.; Kristoffersen JB.; Lagaisse R.; Mavrič B.; Mortelmans J.; Paredes E.; Pavloudi C.; Piazza A.; Power AM.;  Ramšak A.; Santi I.; Solbakken J.; Stavroulaki M.; Stæhr PAU.; Tajadura J.;  Souza  Troncoso J.; Vasileiadou K.; Vernadou E.; Obst M. (2025): ARMS-MBON data on long-term monitoring of hard-bottom communities: ITS results from 2020-2022
Version
v1

Temporal coverage

Temporal
Start date
2020-01-31
End date
2020-11-03

Geographical coverage

Spatial
13E1
17G2
28F0
42F9
43G2
44G1
Abra de Bilbao
Belgian part of the North Sea
Crete Island
Kilkieran Bay and Islands
Kosterfjorden-Väderöfjorden
Plymouth Sound
Tammisaaren Ja Hangon Saariston Ja Pohjanpitäjänlahden Merensuojelualue
The Sound

Thesaurus terms

Keyword
ASSEMBLEPlus Joint Research Activity 1
Benthic communities
Benthic regions
Biodiversity
DNA barcoding
Genome analysis
Invasive species
Long-term records
Species diversity
Species diversity

Themes

theme
Biology > Benthos

Taxonomic terms

Taxon keywords
Acremonium
Agaricaceae
Agaricales
Agaricomycetes
Agaricostilbales
Alternaria
Amandinea punctata
Apiosporaceae
Ascomycota
Aspergillus
Basidiomycota
Biatriospora K.D. Hyde & Borse
Bionectria
Bionectria ochroleuca
Bionectriaceae
Blumeria
Bulleribasidiaceae
Cadophora malorum
Candelariaceae
Candelariella aurella
Capnodiales
Cercophora
Chaetosphaeriales
Chaetothyriales
Chaunopycnis
Chytridiomycota
Cladosporium
Cladosporium herbarum
Cladosporium sphaerospermum
Clitocybe
Cnidaria
Conioscyphales
Cryptococcus
Cryptococcus victoriae
Cystobasidiales
Cystobasidiomycetes
Daldinia
Debaromyces hansenii (Zopf, 1???) Kreger-van Rij,
Devriesia
Didymella
Didymosphaeriaceae
Dipodascaceae
Dothideomycetes
Elasticomyces
Endomycetales
Entolomataceae
Epicoccum nigrum
Eupenicillium
Eurotiales
Eurotiomycetes
Exophiala
Filobasidium
Floricolaceae
Fungi
Fusarium
Gibberella zeae
Helotiaceae
Helotiales
Hemiascomycetes
Herpotrichiellaceae
Hyaloscyphaceae
Hypocrea
Hypocreaceae
Hypocreales
Knufia
Lasiosphaeriaceae
Lecanorales
Leotiomycetes
Leptosphaeria
Leucosporidium
Lulworthiaceae
Lycoperdaceae
Lycoperdon
Microbotryomycetes
Mortierella
Mortierella parvispora
Mortierellaceae
Mortierellales
Mrakia
Nectria pseudotrichia
Nectriaceae
Oidiodendron
Olpidiales
Onygenales
Paraconiothyrium
Paraphaeosphaeria
Paxillus
Petriellidium ellipsoideum
Phaeosphaeriaceae
Phallus
Plectosporium
Pleosporales
Psathyrellaceae
Ramalina
Rhodosporidium infirmominiatum
Rhodotorula mucilaginosa
Rozellida
Russulales
Sclerotiniaceae
Sordariales
Sordariomycetes
Sporidiales
Sporidiobolaceae
Sterigmatomyces halophilus
Talaromyces
Taphrinales
Teloschistaceae
Teratosphaeriaceae
Thyridariaceae
Tremella
Tremellales
Tremellomycetes
Trichocomaceae
Trichosporon diddensiae
Truncatella Risso, 1826
Venturia
Vermiconia

Ownerships

creator
Justine Pagnier
creator
Department of Marine Sciences
contributor
Matthias Obst
contributor
Department of Marine Sciences
contactPoint
Matthias Obst
contactPoint
Department of Marine Sciences
creator
Katrina Exter
creator
Vlaams Instituut voor de Zee
contributor
Ioulia Santi
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
creator
Christina Pavloudi
creator
European Marine Biological Research Centre
creator
Jon Bent Kristoffersen
creator
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Klaas Deneudt
contributor
Vlaams Instituut voor de Zee
contributor
Jonas Mortelmans
contributor
Vlaams Instituut voor de Zee
contributor
Rune Lagaisse
contributor
Vlaams Instituut voor de Zee
contributor
Andreja Ramšak
contributor
Marine Biological Station Piran
contributor
Borut Mavric
contributor
Marine Biological Station Piran
contributor
Jostein Solbakken
contributor
Tvärminne Zoological Station
contributor
Laura Kauppi
contributor
Tvärminne Zoological Station
contributor
Thanos Dailianis
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Emmanouela Vernadou
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Melanthia Stavroulaki
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Katerina Vasileiadou
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Kleoniki Keklikoglou
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Evangelia Chatzinikolaou
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Giorgos Chatzigeorgiou
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Vasilis Gerovasileiou
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Markos Digenis
contributor
Institute of Marine Biology, Biotechnology and Aquaculture
contributor
Peter Anton Staehr
contributor
Department of Ecoscience
contributor
Alessandro Piazza
contributor
Department of Biological, Geological and Environmental Sciences
contributor
Frederica Costantini
contributor
Department of Biological, Geological and Environmental Sciences
contributor
Nathan Chrismas
contributor
Marine Biological Association of the UK
contributor
Ibon Cancio
contributor
Plentzia Marine Station
contributor
Oihane Diaz de Cerio
contributor
Plentzia Marine Station
contributor
Francisco Javier Tajadura
contributor
Plentzia Marine Station
contributor
Jose González
contributor
Grupo de Investigación en Ecología Costera
contributor
Estefanía Paredes Rosendo
contributor
Grupo de Investigación en Ecología Costera
contributor
Jesús Souza Troncoso
contributor
Grupo de Investigación en Ecología Costera

Publication references

related reference
Based on this dataset /id/publication/331624

Dataset references

is part of
ARMS-MBON data on long-term monitoring and biodiversity assessment of invasive and indigenous hard-bottom communities
record
European Ocean Biodiversity Information System

Projects

was generated by
ASSEMBLE+ - Association of European Marine Biological Laboratories Expanded

Special collections

part of special collection
available through EurOBIS
EMODNET

Document metadata

date created
2025-09-16
date modified
2026-01-26