{"datasetrec":{"DasID":8921,"Acronym":null,"StandardTitle":"ARMS-MBON data on long-term monitoring of hard-bottom communities: ITS results from 2020-2022","OrigTitle":null,"OrigTitleLangID":null,"OrigTitleLangCode":null,"OrigTitleLang":null,"OrigTitleLangNL":null,"VersionName":"v1","ContactEmail":"katrina.exter@vliz.be","VersionDate":null,"VersionDay":null,"VersionMonth":null,"VersionYear":null,"SizeReference":null,"EngAbstract":"

ARMS-MBON is a network of more than 25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) settlement units in the vicinity of marine stations and Long-term Ecological Research sites in European coastal waters and Ant\/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the lifeforms that settled on them. The collected data are published (see the related datasets and GitHub links listed in this record) and the omics data analysed. <\/p>

In this record we include the outputs of our analysis of the ITS data from the 2020-2022 campaign. The analysis used the PEMA bioinformatics software, and the resulting taxonomics inventory has been turned into DwC format. In addition, all the PEMA inputs and outputs can be found on the ARMS-MBON GitHub site (see links in this record), and the subset of the sampling data to which these 18S results are linked can also be found on the ARMS-MBON GitHub site.<\/p>","EngDescr":null,"OrigAbstract":null,"OrigDescr":null,"Comments":null,"ReleaseDate":null,"ReleaseDate0":null,"OrigDescrLang":null,"EmbargoDate":null,"OrigDescrLangNL":null,"OrigLangCode":null,"OrigLangCodeExtended":null,"OrigLangID":null,"DescrCompFlag":null,"DescrTransFlag":null,"Citation":"Pagnier J.; Allcock L.; Cancio I.; Chatzinikolaou E.; Chatzigeorgiou G.; Chrismas NAM.; Costantini F.; Dailianis T.; Deneudt K.; Diaz de Cerio, O.; Digenis M.; Exter K.; GerovasileiouV.; , Gonz\u00e1lez Fern\u00e1ndez J.; Kauppi L.; Keklikoglou K.; Kristoffersen JB.; Lagaisse R.; Mavri\u010d B.; Mortelmans J.; Paredes E.; Pavloudi C.; Piazza A.; Power AM.;  Ram\u0161ak A.; Santi I.; Solbakken J.; Stavroulaki M.; St\u00e6hr PAU.; Tajadura J.;  Souza  Troncoso J.; Vasileiadou K.; Vernadou E.; Obst M. (2025): ARMS-MBON data on long-term monitoring of hard-bottom communities: ITS results from 2020-2022","AccessConstraints":null,"UDate":"2026-04-02","CDate":"2025-09-16","CurrencyDate":null,"RevisionDate":null,"DateLastModified":{"date":"2026-04-07 10:24:55.223000","timezone_type":1,"timezone":"+00:00"},"CheckedFlag":0,"PublicFlag":1,"VlizCoreFlag":1,"MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"StatusID":1,"DasType":"Data","DasTypeID":1,"DasOrigin":"Monitoring: field survey","Progress":"Completed","AccessConstraint":"Attribution (CC BY)","AccConstrEN":"Attribution (CC BY)","AccConstrDisplay":"\"Creative<\/a> This dataset is licensed under a Creative Commons Attribution 4.0 International License<\/a>.","License":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/","AccConstrDescription":"This license lets others distribute, remix, tweak, and build upon your work, even commercially, as long as they credit you for the original creation. This is the most accommodating of licenses offered. Recommended for maximum dissemination and use of licensed materials.","Lineage":"Prior to publication data undergo quality control checked which are described in https:\/\/github.com\/EMODnet\/EMODnetBiocheck?tab=readme-ov-file#understanding-the-output","AccConID":21},"dois":null,"spcols":[{"SpColID":619,"SpName":"available through EurOBIS"},{"SpColID":552,"SpName":"EMODNET"}],"keywords":[{"ThesaurusTerm":"ASSEMBLEPlus Joint Research Activity 1","ThesTypID":8,"ThesType":"Assemble KO Types","Code":"JRA1","Description":null,"OrigThesTerm":"ASSEMBLEPlus Joint Research Activity 1","DutchTerm":null,"URI":null,"DasKeywordDescr":null},{"ThesaurusTerm":"Benthic communities","ThesTypID":1,"ThesType":"ASFA Thesaurus List","Code":null,"Description":null,"OrigThesTerm":"Benthic communities","DutchTerm":"Bentische gemeenschappen","URI":null,"DasKeywordDescr":null},{"ThesaurusTerm":"Benthic regions","ThesTypID":1,"ThesType":"ASFA Thesaurus List","Code":null,"Description":null,"OrigThesTerm":"Benthic regions","DutchTerm":null,"URI":null,"DasKeywordDescr":null},{"ThesaurusTerm":"Biodiversity","ThesTypID":1,"ThesType":"ASFA Thesaurus List","Code":"c_33949","Description":null,"OrigThesTerm":"Biodiversity","DutchTerm":"Biodiversiteit","URI":"http:\/\/aims.fao.org\/aos\/agrovoc\/c_33949","DasKeywordDescr":null},{"ThesaurusTerm":"DNA barcoding","ThesTypID":0,"ThesType":null,"Code":null,"Description":null,"OrigThesTerm":"DNA barcoding","DutchTerm":null,"URI":null,"DasKeywordDescr":null},{"ThesaurusTerm":"Genome analysis","ThesTypID":4,"ThesType":"CAB Thesaurus","Code":"51155","Description":null,"OrigThesTerm":"Genome analysis","DutchTerm":null,"URI":"https:\/\/id.cabi.org\/cabt\/51155","DasKeywordDescr":null},{"ThesaurusTerm":"Invasive species","ThesTypID":4,"ThesType":"CAB Thesaurus","Code":"61421","Description":null,"OrigThesTerm":"Invasive species","DutchTerm":null,"URI":"https:\/\/id.cabi.org\/cabt\/61421","DasKeywordDescr":null},{"ThesaurusTerm":"Long-term records","ThesTypID":1,"ThesType":"ASFA Thesaurus List","Code":"c_5fede298","Description":null,"OrigThesTerm":"Long-term records","DutchTerm":"Langetermijn records","URI":"http:\/\/aims.fao.org\/aos\/agrovoc\/c_5fede298","DasKeywordDescr":null},{"ThesaurusTerm":"Species diversity","ThesTypID":1,"ThesType":"ASFA Thesaurus List","Code":"c_00ba8c53","Description":null,"OrigThesTerm":"Species diversity","DutchTerm":"Soortendiversiteit","URI":"http:\/\/aims.fao.org\/aos\/agrovoc\/c_00ba8c53","DasKeywordDescr":null},{"ThesaurusTerm":"Species diversity","ThesTypID":4,"ThesType":"CAB Thesaurus","Code":"109003","Description":null,"OrigThesTerm":"Species diversity","DutchTerm":null,"URI":"https:\/\/id.cabi.org\/cabt\/109003","DasKeywordDescr":null}],"parents":[{"DasID":8135,"Acronym":null,"EngAbstract":"

ARMS-MBON is a network >25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) in the vicinity of marine stations and LTER sites in European coastal waters and Ant\/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the organisms on them. These data will be used to assess the status of, and changes in, the hard-bottom communities of these near-coast environments. The project began in 2018 and in 2023 it will be merged into EMBRC's EMO-BON project. The data here are a spreadsheet with the event metadata and the ENA accession numbers (only for the events that resulted in ENA data), and a spreadsheet with the download links to the images and visual observations made during the sampling events. This data is continuously updated as new events are completed, new sequences are added to ENA, and new image data are created. More data and all documentation can be found on the ARMS-MBON GitHub repository.<\/p>","License":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/","StandardTitle":"ARMS-MBON data on long-term monitoring and biodiversity assessment of invasive and indigenous hard-bottom communities","doi":null,"vlizDoi":null}],"children":null,"othrel":null,"othrelrev":[{"DasID":1510,"Acronym":"EurOBIS","StandardTitle":"European Ocean Biodiversity Information System","Relation":"Published dataset","RelationY":"Published in","RelID":13,"doi":null,"vlizDoi":null}],"ownerships":[{"OrderNr":1,"Surname":"Pagnier","Firstname":"Justine","Initials":"J.","PerPublicFlag":1,"AdrID":169466,"Email":"justine.pagnier@gu.se","InsPublicFlag":1,"Acronym":null,"OrigNameLangCode":null,"OrigNameLangID":null,"FullOrigName":null,"InsOwnerCNT":3,"PersID":44014,"InsID":14530,"FullInstitute":"University of Gothenburg; Faculty of Science; Department of Marine Sciences","RoleID":61,"Role":"Data creator","OrigName":null,"StandardName":"Department of Marine Sciences","FullAcronym":null,"ORC":"https:\/\/orcid.org\/0000-0002-6531-1374","ROR":null},{"OrderNr":2,"Surname":"Obst","Firstname":"Matthias","Initials":"M.","PerPublicFlag":1,"AdrID":null,"Email":null,"InsPublicFlag":1,"Acronym":null,"OrigNameLangCode":null,"OrigNameLangID":null,"FullOrigName":null,"InsOwnerCNT":3,"PersID":34431,"InsID":14530,"FullInstitute":"University of Gothenburg; 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