{"personrec":{"StatusID":1,"PersStatus":null,"Status":"Valid","PersID":20767,"PersName":"Pesant, Stéphane","PublicFlag":1,"CheckedFlag":0,"Surname":"Pesant","Firstname":"Stéphane","Initials":"S.","AddressedAs":null,"Function":null,"DateLastModified":{"date":"2024-06-04 01:34:08.417000","timezone_type":1,"timezone":"+00:00"},"PersTitle":"Dr","PersStatusID":null,"AbstractEnglish":null,"AbstractOtherLang":null,"AbstractLangCode":null,"AbstractLangID":null,"AutID":126486,"ND":"2010-01-20","UD":"2010-01-20","ORCID":"0000-0002-4936-5209"},"loaninfo":null,"pictures":[],"institutes":[{"instituterec":{"OrderNr":1,"Acronym":"EBI","ENFunction":null,"InsIDtmp":12810,"OrigNameLangCode":null,"OrigNameLangID":null,"FullOrigName":null,"InsID":12810,"Function":null,"BeginDay":null,"BeginMonth":null,"BeginYear":null,"Begindate":"","Enddate":"","PIAdrID":164398,"AdrID":154240,"Line1":null,"Line2":null,"Line3":null,"Line4":null,"Phone":null,"GSM":null,"Email":"pesant@ebi.ac.uk","EnvName":"UK","EncAddress":"Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK","FullStandardName":"European Molecular Biology Laboratory; European Bioinformatics Institute","DirectorFlag":null,"MarineSciFlag":null,"SpecializedFlag":null},"parent":null,"institutes":null,"references":null,"conferences":null,"datasets":null,"persons":null,"pastpers":null,"subpers":null,"projects":null,"urls":null,"pictures":null,"published":null,"affrefs":null,"collections":null,"thesterms":null,"taxterms":null,"geoterms":null,"thestermsFRIS":null,"nXtins":null,"previns":null,"spcols":null,"resmessage":"no id specified","complete":0,"participantrec":null,"peerrevs":null,"urlmaps":null}],"pastins":[{"instituterec":{"InsID":4875,"FullOrigName":null,"Acronym":"LOV","Function":null,"BeginDay":null,"BeginMonth":null,"BeginYear":null,"EndDay":null,"EndMonth":null,"EndYear":null,"Notes":null,"Line1":null,"Line2":null,"Line3":null,"Line4":null,"Phone":null,"GSM":null,"Email":null,"FullStandardName":"Sorbonne Université; Sorbonne Université/CNRS, Laboratoire d'Océanographie de Villefranche"},"parent":null,"institutes":null,"references":null,"conferences":null,"datasets":null,"persons":null,"pastpers":null,"subpers":null,"projects":null,"urls":null,"pictures":null,"published":null,"affrefs":null,"collections":null,"thesterms":null,"taxterms":null,"geoterms":null,"thestermsFRIS":null,"nXtins":null,"previns":null,"spcols":null,"resmessage":"no id specified","complete":0,"participantrec":null,"peerrevs":null,"urlmaps":null},{"instituterec":{"InsID":2838,"FullOrigName":"Universität Bremen; Zentrum für Marine Umweltwissenschaften","Acronym":"MARUM","Function":null,"BeginDay":null,"BeginMonth":null,"BeginYear":null,"EndDay":null,"EndMonth":null,"EndYear":null,"Notes":null,"Line1":null,"Line2":null,"Line3":null,"Line4":null,"Phone":null,"GSM":null,"Email":null,"FullStandardName":"University of Bremen; Centre for Marine Environmental Sciences"},"parent":null,"institutes":null,"references":null,"conferences":null,"datasets":null,"persons":null,"pastpers":null,"subpers":null,"projects":null,"urls":null,"pictures":null,"published":null,"affrefs":null,"collections":null,"thesterms":null,"taxterms":null,"geoterms":null,"thestermsFRIS":null,"nXtins":null,"previns":null,"spcols":null,"resmessage":"no id specified","complete":0,"participantrec":null,"peerrevs":null,"urlmaps":null}],"projects":[{"ProID":3316,"Acronym":"EMODNET BIO I","Progress":"Completed","StandardTitle":"European Marine Observation and Data Network - Biology Lot","BeginYear":2009,"EndYear":2011}],"datasets":[{"DasID":6515,"Acronym":null,"Citation":"Romagnan, J.B., Jalabert, L., Olivier, M., Elineau, A., Brandao, M., Caray-Counil, L., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Irisson, J.O., Lombard, F., Stemmann, L., Gorsky, G.; (2020) Occurrence of Eukaryotes in the size fraction >200 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a WPII net and analysed on a ZooScan imaging platform.","Title":"Occurrence of Eukaryotes in the size fraction >200 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a WPII net and analysed on a ZooScan imaging platform.","DasType":"Data"},{"DasID":6512,"Acronym":null,"Citation":"Romagnan, J.B., Jalabert, L., Llopiz Monferrer, N., Elineau, A., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Irisson, J.O., Lombard, F., Stemmann, L., Gorsky, G.; (2020) Occurrence of Eukaryotes in the size fraction >300 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Bongo net and analysed on a ZooScan imaging platform","Title":"Occurrence of Eukaryotes in the size fraction >300 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Bongo net and analysed on a ZooScan imaging platform","DasType":"Data"},{"DasID":6513,"Acronym":null,"Citation":"Romagnan, J.B., Jalabert, L., Llopiz Monferrer, N., Merland, C., Trudnowska, E., Brandao, M.,  Elineau, A., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Irisson, J.O., Lombard, F., Stemmann, L., Gorsky, G.; (2020) Occurrence of Eukaryotes in the size fraction >300 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Multinet and analysed on a ZooScan imaging platform","Title":"Occurrence of Eukaryotes in the size fraction >300 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Multinet and analysed on a ZooScan imaging platform","DasType":"Data"},{"DasID":6514,"Acronym":null,"Citation":"Romagnan, J.B., Jalabert, L., Brandao, M., Caray-Counil, L., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, s., Irisson, J.O., Lombard, F., Stemmann, L., Gorsky, G.; (2020) Occurrence of Eukaryotes in the size fraction >680 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Régent net and analysed on a ZooScan imaging platform.","Title":"Occurrence of Eukaryotes in the size fraction >680 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a Régent net and analysed on a ZooScan imaging platform","DasType":"Data"},{"DasID":6520,"Acronym":null,"Citation":"Coelho, L.O., Colin, S., Berthelot, H., Santangeli, L., Lombard, F., Carsique, M., Dvorak, E., Pierella, J., Vincent, F., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Sunagawa, S., C., Bowler, Bork, P., Pepperkok, R., de Vargas C.,; (2020) Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by environmental High Content Fluorescence Microscopy (e-HCFM). <doi>","Title":"Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by environmental High Content Fluorescence Microscopy (e-HCFM).","DasType":"Data"},{"DasID":6516,"Acronym":null,"Citation":"Scalco, E., Sarno, D., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Bowler, C., Zingone, A.; (2020) Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by inverted light microscopy.","Title":"Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by inverted light microscopy.","DasType":"Data"},{"DasID":6517,"Acronym":null,"Citation":"Karp Boss, L., Romagnan, J.B., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Irisson, J.O., Lombard, F., Stemmann, L., Gorsky, G.: (2020) Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed with a FlowCam imaging platform.","Title":"Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed with a FlowCam imaging platform.","DasType":"Data"},{"DasID":6518,"Acronym":null,"Citation":"Reynaud, E., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S.: (2020) Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed with a FlowCam imaging platform.","Title":"Occurrence of Eukaryotes in the size fraction 20-180 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed with a FlowCam imaging platform.","DasType":"Data"},{"DasID":6519,"Acronym":null,"Citation":"Colin, S., Coelho, L.P., Berthelot, H., Soun, C., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., Sunagawa, S., Bowler, C., Bork, P., Pepperkok, R., de Vargas, C.: (2020) Occurrence of Eukaryotes in the size fraction 5-20 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by environmental High Content Fluorescence Microscopy (e-HCFM). <doi>","Title":"Occurrence of Eukaryotes in the size fraction 5-20 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using a ring net and analysed by environmental High Content Fluorescence Microscopy (e-HCFM).","DasType":"Data"},{"DasID":6521,"Acronym":null,"Citation":"Sarmento, H., Royo-Llonch, M., Dimier, C., Picheral, M., Searson, S., Kandels-Lewis, S., Tara Oceans Consortium Coordinators, Karsenti, E., Pesant, S., G. Acinas, S., M Gasol J.; (2020) Occurrence of Prokaryotes and Eukaryotes in the size fraction <5 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using either Niskin bottles or a large volume peristaltic pump and analysed by flow cytometry. <doi>","Title":"Occurrence of Prokaryotes and Eukaryotes in the size fraction <5 micrometres, collected worldwide during the Tara Oceans expedition (2009-2013) using either Niskin bottles or a large volume peristaltic pump and analysed by flow cytometry.","DasType":"Data"}],"references":{"A1":[{"BRefID":369448,"RR":"<b>Ghiglione, J.-F.; Barbe, V.; Bruzaud, S.; Burgaud, G.; Cachot, J.; Eyheraguibel, B.; Lartaud, F.; Ludwig, W.; Meistertzheim, A.-L.; Paul-Pont, I.; Pesant, S.; ter Halle, A.; Thiebeauld, O.; Mission Tara Microplastics consortium</b> (2023). Mission Tara microplastics: a holistic set of protocols and data resources for the field investigation of plastic pollution along the land-sea continuum in Europe. <i>Environm. Sc. & Poll. Res. Online First</i>. <a href=\"https://dx.doi.org/10.1007/s11356-023-26883-9\" target=\"_blank\">https://dx.doi.org/10.1007/s11356-023-26883-9</a>","AutID":126486,"MonDate":null,"AnaDate":2023,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":351003,"RR":"<b>Zayed, A.A.; Wainaina, J.M.; Domínguez-Huerta, G.; Pelletier, E.; Guo, J.; Mohssen, M.; Tian, F.; Pratama, A.A.; Bolduc, B.; Zablocki, O.; Cronin, D.; Solden, L.; Delage, E.; Alberti, A.; Aury, J.-M.; Carradec, Q.; Da Silva, C.; Labadie, K.; Poulain, J.; Ruscheweyh, H.-J.; Salazar, G.; Shatoff, E.; Bundschuh, R.; Fredrick, K.; Kubatko, L.S.; Chaffron, S.; Culley, A.I.; Sunagawa, S.; Kuhn, J.H.; Wincker, P.; Sullivan, M.B.; Acinas, S.G.; Babin, M.; Bork, P.; Boss, E.; Bowler, C.; Cochrane, G.; de Vargas, C.; Gorsky, G.; Guidi, L.; Grimsley, N.; Hingamp, P.; Iudicone, D.; Jaillon, O.; Kandels, S.; Karp-Boss, L.; Karsenti, E.; Not, F.; Ogata, H.; Poulton, N.; Pesant, S.; Sardet, C.; Speich, S.; Stemmann, L.; Tara Oceans Coordinators</b> (2022). Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome. <i>Science (Wash.) 376(6589)</i>: 156-162. <a href=\"https://dx.doi.org/10.1126/science.abm5847\" target=\"_blank\">https://dx.doi.org/10.1126/science.abm5847</a>","AutID":126486,"MonDate":null,"AnaDate":2022,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":353585,"RR":"<b>Acinas, S.G.; Sánchez, P.; Salazar, G.; Cornejo-Castillo, F.M.; Sebastian, M.; Logares, R.; Royo-Llonch, M.; Paoli, L.; Sunagawa, S.; Hingamp, P.; Ogata, H.; Lima-Mendez, G.; Roux, S.; González, J.M.; Arrieta, J.M.; Alam, I.S.; Kamau, A.; Bowler, C.; Raes, J.; Pesant, S.; Bork, P.; Agusti, S.; Gojobori, T.; Vaqué, D.; Sullivan, M.B.; Pedrós-Alió, C.; Massana, R.; Duarte, C.M.; Gasol, J.M.</b> (2021). Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities. <i>Communications Biology 4(1)</i>: 604. <a href=\"https://dx.doi.org/10.1038/s42003-021-02112-2\" target=\"_blank\">https://dx.doi.org/10.1038/s42003-021-02112-2</a>","AutID":126486,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":310665,"RR":"<b>Gregory, A.C.; Zayed, A.; Conceição-Neto, N.; Temperton, B.; Bolduc, B.; Alberti, A.; Ardyna, M.; Arkhipova, K.; Carmichael, M.; Cruaud, C.; Dimier, C.; Domínguez-Huerta, G.; Ferland, J.; Kandels, S.; Liu, Y.; Marec, C.; Pesant, S.; Picheral, M.; Pisarev, S.; Poulain, J.; Tremblay, J.-E.; Vik, D.; Babin, M.; Bowler, C.; Culley, A.I.; de Vargas, C.; Dutilh, B.E.; Iudicone, D.; Karp-Boss, L.; Roux, S.; Sunagawa, S.; Wincker, P.; Sullivan, M.; Acinas, S.G.; Bork, P.; Boss, E.; Bowler, C.; Cochrane, G.; Follows, M.; Gorsky, G.; Grimsley, N.; Guidi, L.; Hingamp, P.; Jaillon, O.; Kandels-Lewis, S.; Karsenti, E.; Not, F.; Ogata, H.; Poulton, N.; Sardet, C.; Speich, S.; Stemmann, L.</b> (2019). Marine DNA viral macro- and microdiversity from Pole to Pole. <i>Cell 177(5)</i>: 1-15. <a href=\"https://dx.doi.org/10.1016/j.cell.2019.03.040\" target=\"_blank\">https://dx.doi.org/10.1016/j.cell.2019.03.040</a>","AutID":126486,"MonDate":null,"AnaDate":2019,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":292335,"RR":"<b>Seeleuthner, Y.; Mondy, S.; Lombard, V.; Carradec, Q.; Pelletier, E.; Wessner, M.; Leconte, J.; Mangot, J.-F.; Poulain, J.; Labadie, K.; Logares, R.; Sunagawa, S.; de Berardinis, V.; Tara Oceans Coordinators; Pesant, S.; Poulton, N.; Stepanauskas, R.; Bork, P.; Bowler, C.; Hingamp, P.; Sullivan, M.B.; Iudicone, D.; Massana, R.; Aury, J.-M.; Henrissat, B.; Karsenti, E.; Jaillon, O.; Sieracki, M.; de Vargas, C.; Wincker, P.</b> (2018). Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. <i>Nature Comm. 9(1)</i>: 10 pp. <a href=\"https://dx.doi.org/10.1038/s41467-017-02235-3\" target=\"_blank\">https://dx.doi.org/10.1038/s41467-017-02235-3</a>","AutID":126486,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":301275,"RR":"<b>Alberti, A.; Poulain, J.; Engelen, S.; Labadie, K.; Romac, S.; Ferrera, I.; Albini, G.; Aury, J.-M.; Belser, C.; Bertrand, A.; Cruaud, C.; Da Silva, C.; Dossat, C.; Gavory, F.; Gas, S.; Guy, J.; Haquelle, M.; Jacoby, E.; Jaillon, O.; Lemainque, A.; Pelletier, E.; Samson, G.; Wessner, M.; Acinas, S.G.; Royo-Llonch, M.; Cornejo-Castillo, F.M.; Logares, R.; Fernandez-Gomez, B.; Bowler, C.; Cochrane, G.; Amid, C.; ten Hoopen, P.; de Vargas, C.; Grimsley, N.; Desgranges, E.; Kandels-Lewis, S.; Ogata, H.; Poulton, N.; Sieracki, M.E.; Stepanauskas, R.; Sullivan, M.B.; Brum, J.R.; Duhaime, M.B.; Poulos, B.T.; Hurwitz, B.L.; Pesant, S.; Karsenti, E.; Wincker, P.; Bork, P.; Boss, E.; Follows, M.; Gorsky, G.; Hingamp, P.; Iudicone, D.; Karp-Boss, L.; Not, F.; Raes, J.; Sardet, C.; Speich, S.; Stemmann, L.; Sunagawa, S.; Bazire, P.; Beluche, O.; Besnard-Gonnet, M.; Bordelais, I.; Boutard, M.; Dubois, M.; Dumont, C.; Ettedgui, E.; Fernández, P.; Garcia, E.; Aiach, N.G.; Guerin, T.; Hamon, C.; Brun, E.; Lebled, S.; Lenoble, P.; Louesse, C.; Mahieu, E.; Mairey, B.; Martins, N.; Megret, C.; Milani, C.; Muanga, J.; Orvain, C.; Payen, E.; Perroud, P.; Petit, E.; Robert, D.; Ronsin, M.; Vacherie, B.</b> (2017). Viral to metazoan marine plankton nucleotide sequences from the <i>Tara</i> Oceans expedition. <i>Scientific Data 4</i>: 20. <a href=\"https://dx.doi.org/10.1038/sdata.2017.93\" target=\"_blank\">https://dx.doi.org/10.1038/sdata.2017.93</a>","AutID":126486,"MonDate":null,"AnaDate":2017,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":255351,"RR":"<b>Guidi, L.; Chaffron, S.; Bittner, L.; Eveillard, D.; Larhlimi, A.; Roux, S.; Darzi, Y.; Audic, S.; Berline, L.; Brum, J.R.; Coelho, L.P.; Ignacio-Espinoza, J.C.; Malviya, S.; Sunagawa, S.; Dimier, C.; Kandels-Lewis, S.; Picheral, M.; Poulain, J.; Searson, S.; Tara Oceans Consortium Coordinators; Stemmann, L.; Not, F.; Hingamp, P.; Speich, S.; Follows, M.; Karp-Boss, L.; Boss, E.S.; Ogata, H.; Pesant, S.; Weissenbach, J.; Wincker, P.; Acinas, S.G.; Bork, P.; de Vargas, C.; Iudicone, D.; Sullivan, M.B.; Raes, J.; Karsenti, E.; Bowler, C.; Gorsky, G.</b> (2016). Plankton networks driving carbon export in the oligotrophic ocean. <i>Nature (Lond.) 532(7600)</i>: 465-470. <a href=\"https://hdl.handle.net/10.1038/nature16942\" target=\"_blank\">https://hdl.handle.net/10.1038/nature16942</a>","AutID":126486,"MonDate":null,"AnaDate":2016,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":261520,"RR":"<b>Roux, S.; Brum, J.R.; Dutilh, B.E.; Sunagawa, S.; Duhaime, M.B.; Loy, A.; Poulos, B.T.; Solonenko, N.; Lara, E.; Poulain, J.; Pesant, S.; Kandels-Lewis, S.; Dimier, C.; Picheral, M.; Searson, S.; Cruaud, C.; Alberti, A.; Duarte, C. M.; Gasol, J.M.; Vaqué, D.; Bork, P.; Acinas, S.G.; Wincker, P.; Sullivan, M.B.; Tara Oceans Coordinators</b> (2016). Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses. <i>Nature (Lond.) 537(7622)</i>: 689–693. <a href=\"http://dx.doi.org/10.1038/nature19366\" target=\"_blank\">http://dx.doi.org/10.1038/nature19366</a>","AutID":126486,"MonDate":null,"AnaDate":2016,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":247192,"RR":"<b>Brum, J.R.; Ignacio-Espinoza, J.C.; Roux, S.; Doulcier, G.; Acinas, S.G.; Alberti, A.; Chaffron, S.; Cruaud, C.; de Vargas, C.; Gasol, J.M.; Gorsky, G.; Gregory, A.C.; Guidi, L.; Hingamp, P.; Iudicone, D.; Not, F.; Ogata, H.; Pesant, S.; Poulos, B.T.; Schwenck, S.M.; Speich, S.; Dimier, C.; Kandels-Lewis, S.; Picheral, M.; Searson, S.; Bork, P.; Bowler, C.; Sunagawa, S.; Wincker, P.; Karsenti, E.; Sullivan, M.B.</b> (2015). Patterns and ecological drivers of ocean viral communities. <i>Science (Wash.) 348(6237)</i>: 10 pp. <a href=\"http://dx.doi.org/10.1126/science.1261498\" target=\"_blank\">http://dx.doi.org/10.1126/science.1261498</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":247193,"RR":"<b>de Vargas, C.; Audic, S.; Henry, N.; Decelle, J.; Mahé, F.; Logares, R.; Lara, E.; Berney, C.; Le Bescot, N.; Probert, I.; Carmichael, M.; Poulain, J.; Romac, S.; Colin, S.; Aury, J.-M.; Bittner, L.; Chaffron, S.; Dunthorn, M.; Engelen, S.; Flegontova, O.; Guidi, L.; Horák, A.; Jaillon, O.; Lima-Mendez, G.; Lukeš, J.; Malviya, S.; Morard, R.; Mulot, M.; Scalco, E.; Siano, R.; Vincent, F.; Zingone, A.; Dimier, C.; Picheral, M.; Searson, S.; Kandels-Lewis, S.; Acinas, S.G.; Bork, P.; Bowler, C.; Gorsky, G.; Grimsley, N.; Hingamp, P.; Iudicone, D.; Not, F.; Ogata, H.; Pesant, S.; Raes, J.; Sieracki, M.E.; Speich, S.; Stemmann, L.; Sunagawa, S.; Weissenbach, J.; Wincker, P.; Karsenti, E.</b> (2015). Eukaryotic plankton diversity in the sunlit ocean. <i>Science (Wash.) 348(6237)</i>: 11 pp. <a href=\"http://dx.doi.org/10.1126/science.1261605\" target=\"_blank\">http://dx.doi.org/10.1126/science.1261605</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":247953,"RR":"<b>Kopf, A.; Bicak, M.; Kottmann, R.; Schnetzer, J.; Kostadinov, I.; Lehmann, K.; Fernàndez-Guerra, A.; Jeanthon, C.; Rahav, E.; Ullrich, M.; Wichels, A.; Gerdts, G.; Polymenakou, P.; Kotoulas, G.; Siam, R.; Abdallah, R.Z.; Sonnenschein, E.; Cariou, T.; O'Gara, F.; Jackson, S.; Orlic, S.; Steinke, M.; Busch, J.; Duarte, B.; Caçador, I.; Canning-Clode, J.; Marteinsson, V.; Reynisson, E.; Loureiro, C.M.; Luna, G.M.; Quero, G.M.; Löscher, C.R.; Kremp, A.; DeLorenzo, M.E.; Øvreås, L.; Tolman, J.; LaRoche, J.; Penna, A.; Frischer, M.; Davis, T.; Barker, K.; Meyer, C.P.; Ramos, S.; Magalhães, C.; Jude-Lemeilleur, F.; Aguirre-Macedo, M.L.; Wang, S.; Poulton, N.; Jones, S.; Collin, R.; Fuhrman, J.A.; Conan, P.; Alonso, C.; Stambler, N.; Goodwin, K.; Yakimov, M.M.; Baltar, F.; Bodrossy, L.; Van de Kamp, J.; Frampton, D.M.F.; Ostrowski, M.; Van Ruth, P.; Malthouse, P.; Claus, S.; Deneudt, K.; Mortelmans, J.; Pitois, S.; Wallom, D.; Salter, I.; Costa, R.; Schroeder, D.C.; Kandil, M.M.; Amaral, V.; Biancalana, F.; Santana, R.; Pedrotti, M.L.; Yoshida, T.; Ogata, H.; Ingleton, T.; Munnik, K.; Rodriguez-Ezpeleta, N.; Berteaux-Lecellier, V.; Wecker, P.; Cancio, I.; Vaulot, D.; Bienhold, C.; Ghazal, H.; Chaouni, B.; Essayer, S.; Ettamimi, S.; Zaid, E.H.; Boukhatem, N.; Bouali, A.; Chahboune, R.; Barrijal, S.; Timinouni, M.; El Otmani, F.; Bennani, M.; Mea, M.; Todorova, N.; Karamfilov, V.; ten Hoopen, P.; Cochrane, G.; L'Haridon, S.; Bizsel, K.C.; Vezzi, A.; Lauro, F.M.; Martin, P.; Jensen, R.M.; Hinks, J.; Gebbels, S.; Rosselli, R.; De Pascale, F.; Schiavon, R.; dos Santos, A.; Villar, E.; Pesant, S.; Cataletto, B.; Malfatti, F.; Edirisinghe, R.; Herrera Silveira, J.A.; Barbier, M.; Turk, V.; Tinta, T.; Fuller, W.J.; Salihoglu, I.; Serakinci, N.; Ergoren, M.C.; Bresnan, E.; Iriberri, J.; Nyhus, P.A.F.; Bente, E.; Karlsen, H.E.; Golyshin, P.N.; Gasol, J.M.; Moncheva, S.; Dzhembekova, N.; Johnson, Z.; Sinigalliano, C.D.; Gidley, M.L.; Zingone, A.; Danovaro, R.; Tsiamis, G.; Clark, M.S.; Costa, A.C.; El Bour, M.; Martins, A.M.; Collins, R.E.; Ducluzeau, A.-L.; Martinez, J.; Costello, M.J.; Amaral-Zettler, L.A.; Gilbert, J.A.; Davies, N.; Field, D.; Glóckner, F.O.</b> (2015). The ocean sampling day consortium. <i>GigaScience 4</i>: 27. <a href=\"http://dx.doi.org/10.1186/s13742-015-0066-5\" target=\"_blank\">http://dx.doi.org/10.1186/s13742-015-0066-5</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":247195,"RR":"<b>Lima-Mendez, G.; Faust, K.; Henry, N.; Decelle, J.; Colin, S.; Carcillo, F.; Chaffron, S.; Ignacio-Espinoza, J.C.; Roux, S.; Vincent, F.; Bittner, L.; Darzi, Y.; Wang, J.; Audic, S.; Berline, L.; Bontempi, G.; Cabello, A.M.; Coppola, L.; Cornejo-Castillo, F.M.; De Meester, L.; Ferrera, I.; Garet-Delmas, M.-J.; Guidi, L.; Lara, E.; Pesant, S.; Royo-Llonch, M.; Salazar, G.; Sánchez, P.; Sebastian, M.; Souffreau, C.; Dimier, C.; Picheral, M.; Searson, S.; Kandels-Lewis, S.; Gorsky, G.; Not, F.; Ogata, H.; Speich, S.; Stemmann, L.; Weissenbach, J.; Wincker, P.; Acinas, S.G.; Sunagawa, S.; Bork, P.; Sullivan, M.B.; Karsenti, E.; Bowler, C.; de Vargas, C.; Raes, J.</b> (2015). Determinants of community structure in the global plankton interactome. <i>Science (Wash.) 348(6237)</i>: 9 pp. <a href=\"http://dx.doi.org/10.1126/science.1262073\" target=\"_blank\">http://dx.doi.org/10.1126/science.1262073</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":324624,"RR":"<b>Pesant, S.; Tara Oceans Consortium Coordinators; Not, F.; Picheral, M.; Kandels-Lewis, S.; Le Bescot, N.; Gorsky, G.; Iudicone, D.; Karsenti, E.; Speich, S.; Troublè, R.; Dimier, C.; Searson, S.</b> (2015). Open science resources for the discovery and analysis of Tara Oceans data. <i>Scientific Data 2(1)</i>. <a href=\"https://dx.doi.org/10.1038/sdata.2015.23\" target=\"_blank\">https://dx.doi.org/10.1038/sdata.2015.23</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":247188,"RR":"<b>Sunagawa, S.; Coelho, L.P.; Chaffron, S.; Kultima, J.R.; Labadie, K.; Salazar, G.; Djahanschiri, B.; Zeller, G.; Mende, D.R.; Alberti, A.; Cornejo-Castillo, F.M.; Costea, P.I.; Cruaud, C.; d'Ovidio, F.; Engelen, S.; Ferrera, I.; Gasol, J.M.; Guidi, L.; Hildebrand, F.; Kokoszka, F.; Lepoivre, C.; Lima-Mendez, G.; Poulain, J.; Poulos, B.T.; Royo-Llonch, M.; Sarmento, H.; Vieira-Silva, S.; Dimier, C.; Picheral, M.; Searson, S.; Kandels-Lewis, S.; Bowler, C.; de Vargas, C.; Gorsky, G.; Grimsley, N.; Hingamp, P.; Iudicone, D.; Jaillon, O.; Not, F.; Ogata, H.; Pesant, S.; Speich, S.; Stemmann, L.; Suillivan, M.B.; Weissenbach, J.; Wincker, P.; Karsenti, E.; Raes, J.; Acinas, S.G.; Bork, P.</b> (2015). Structure and function of the global ocean microbiome. <i>Science (Wash.) 348(6237)</i>: 9 pp. <a href=\"http://dx.doi.org/10.1126/science.1261359\" target=\"_blank\">http://dx.doi.org/10.1126/science.1261359</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":246538,"RR":"<b>ten Hoopen, A.; Pesant, S.; Kottmann, R.; Kopf, A.; Bicak, M.; Claus, S.; Deneudt, K.; Borremans, C.; Thijssen, P.; Dekeyzer, S.; Schaap, D.M.A.; Bowler, C.; Glóckner, F.O.; Cochrane, G.</b> (2015). Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards. <i>Stand Genomic Sci. 10</i>: 20 [1-10]. <a href=\"https://dx.doi.org/10.1186/s40793-015-0001-5\" target=\"_blank\">https://dx.doi.org/10.1186/s40793-015-0001-5</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":247190,"RR":"<b>Villar, E.; Farrant, G.K.; Follows, M.; Garczarek, L.; Speich, S.; Audic, S.; Bittner, L.; Blanke, B.; Brum, J.R.; Brunet, C.; Casotti, R.; Chase, A.; Dolan, J.R.; D'Ortenzio, F.; Gattuso, J.P.; Grimal, N.; Guidi, L.; Hill, C.N.; Jahn, O.; Jamet, J.-L.; Le Goff, H.; Lepoivre, C.; Malviya, S.; Pelletier, E.; Romagnan, J.-B.; Roux, S.; Santini, S.; Scalco, E.; Schwenck, S.M.; Tanaka, A.; Testor, P.; Vannier, T.; Vincent, F.; Zingone, A.; Dimier, C.; Picheral, M.; Searson, S.; Kandels-Lewis, S.; Acinas, S.G.; Bork, P.; Boss, E.; de Vargas, C.; Gorsky, G.; Ogata, H.; Pesant, S.; Sullivan, M.B.; Sunagawa, S.; Wincker, P.; Karsenti, E.; Bowler, C.; Not, F.; Hingamp, P.; Iudicone, D.</b> (2015). Environmental characteristics of Agulhas rings affect interocean plankton transport. <i>Science (Wash.) 348(6237)</i>: 11 pp. <a href=\"http://dx.doi.org/10.1126/science.1261447\" target=\"_blank\">http://dx.doi.org/10.1126/science.1261447</a>","AutID":126486,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":259130,"RR":"<b>Hingamp, P.; Grimsley, N.; Acinas, S.G.; Clerissi, C.; Subirana, L.; Poulain, J.; Ferrera, I.; Sarmento, H.; Villar, E.; Lima-Mendez, G.; Faust, K.; Sunagawa, S.; Claverie, J.-M.; Moreau, H.; Desdevises, Y.; Bork, P.; Raes, J.; de Vargas, C.; Karsenti, E.; Kandels-Lewis, S.; Jaillon, O.; Not, F.; Pesant, S.; Wincker, P.; Ogata, H.</b> (2013). Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes. <i>ISME J. 7(9)</i>: 1678-1695. <a href=\"https://dx.doi.org/10.1038/ismej.2013.59\" target=\"_blank\">https://dx.doi.org/10.1038/ismej.2013.59</a>","AutID":126486,"MonDate":null,"AnaDate":2013,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":247923,"RR":"<b>Karsenti, E.; Acinas, S.G.; Bork, P.; Bowler, C.; de Vargas, C.; Raes, J.; Sullivan, M.; Arendt, D.; Benzoni, F.; Claverie, J.-M.; Follows, M.; Gorsky, G.; Hingamp, P.; Iudicone, D.; Jaillon, O.; Kandels-Lewis, S.; Krzic, U.; Not, F.; Ogata, H.; Pesant, S.; Reynaud, E.G.; Sardet, C.; Sieracki, M.E.; Speich, S.; Velayoudon, D.; Weissenbach, J.; Wincker, P.; Tara Oceans Consortium</b> (2011). A holistic approach to marine eco-systems biology. <i>PLoS Biology 9(10)</i>: e1001177. <a href=\"http://dx.doi.org/10.1371/journal.pbio.1001177\" target=\"_blank\">http://dx.doi.org/10.1371/journal.pbio.1001177</a>","AutID":126486,"MonDate":null,"AnaDate":2011,"PeerRev":1,"outputType":"1_A1","OpenAcc":1}],"Abstr":[{"BRefID":206212,"RR":"<b>Appeltans, W.; Claus, S.; Vandepitte, L.; Herman, P.; Holdsworth, N.; Maudire, G.; Ó Tuama, É.; Pesant, S.; Schaap, D.M.A.; Vanden Berghe, E.; Vladymyrov, V.; Hernandez, F.</b> (2011). Progress towards a European portal on marine species observations, <b><i>in</i></b>: <i>The future of the 21st century ocean: Marine Sciences and European Research Infrastructures. An International Symposium, 28th June - 1 July 2011 Brest, France.</i> pp. 31","AutID":126486,"MonDate":null,"AnaDate":2011,"PeerRev":0,"outputType":"6_Abstr","OpenAcc":1},{"BRefID":198939,"RR":"<b>Claus, S.; Vandepitte, L.; Appeltans, W.; Deneudt, K.; Vanhoorne, B.; Hernandez, F.; Mees, J.; Heip, C.H.R.; Holdsworth, N.; Maudire, G.; McDonough, N.; Ó Tuama, É.; Pesant, S.; Pissierssens, P.; Schaap, D.M.A.; Vanden Berghe, E.; Vladymyrov, V.</b> (2010). Development of a Marine Biological Data Portal within the framework of the European Marine Observation and Data Network (EMODNet), <b><i>in</i></b>: Fichaut, M. <i>et al.</i> <i>IMDIS 2010 International Marine Data and Information Systems Conference, 29-31 March 2010, Paris, France: Book of abstracts.</i> pp. 57","AutID":126486,"MonDate":null,"AnaDate":2010,"PeerRev":0,"outputType":"6_Abstr","OpenAcc":0}],"Report":[{"BRefID":334127,"RR":"<b>Bolhuis, H.; Buttigieg, P.L.; Goodwin, K.; Groben, R.; Iudicone, D.; Lacoursière-Roussel, A.; Pesant, S.; Robinson, S.; Björnsson, S.; Erlendsson, L.S.; Rae, M.</b> (2020). Atlantic Ocean Research Alliance - Marine Microbiome Roadmap. Atlantic Ocean Research Alliance (AORA): [s.l.].  <a href=\"https://doi.org/10.5281/zenodo.3632526\" target=\"_blank\">https://doi.org/10.5281/zenodo.3632526</a>","AutID":126486,"MonDate":2020,"AnaDate":null,"PeerRev":0,"outputType":"7_Report","OpenAcc":1},{"BRefID":215618,"RR":"<b>Claus, S.; Vandepitte, L.; Deneudt, K.; Hernandez, F.; Mees, J.; Vanhoorne, B.; Waumans, F.; Costello, M.J.; Garthe, S.; Herman, P.; Pesant, S.; Pinn, E.H.; Stienen, E.; Vanden Berghe, E.; Webb, T.; Arvanitidis, C.</b> (2012). Report of the Biological Data Analysis Workshop of the European Marine Observation and Data Network (EMODnet). <i>VLIZ Special Publication</i>, 56. Vlaams Instituut voor de Zee (VLIZ): Oostende. 35 pp.","AutID":126486,"MonDate":2012,"AnaDate":null,"PeerRev":0,"outputType":"7_Report","OpenAcc":1}]},"urls":[{"URL":"https://orcid.org/0000-0002-4936-5209","externalID":"0000-0002-4936-5209","URLTypeCode":"ORCID","URLType":"ORCID"},{"URL":"https://www.ebi.ac.uk/about/people/stephane-pesant","externalID":null,"URLTypeCode":null,"URLType":"Personal home page"}],"spcols":null,"thesterms":null,"taxterms":null,"pub":1,"newses":{"SesID":39774,"LoginName":"VLIZ2000\\ruthv","LoginID":79,"DD":"2010-01-20"},"updses":{"SesID":39774,"LoginName":"VLIZ2000\\ruthv","LoginID":79,"DD":"2010-01-20"},"urlmaps":[],"resmessage":"no id specified","complete":1}