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Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=2148","Title":"Linking Microbial Community Function to Phylogeny of Sulfate-Reducing Deltaproteobacteria in Marine Sediments","DasType":"Data"},{"DasID":1208,"Acronym":null,"Citation":"Boschker E., Stal L. 2006: Whole ecosystem 15N labelling study. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1208","Title":"N-Schor: Whole ecosystem 15N labelling study in the Scheldt","DasType":"Data"},{"DasID":1211,"Acronym":null,"Citation":"Boschker E., Stal L. 2006: PLFA-RNA biomarker study. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1211","Title":"VIDI-EB: PLFA-RNA biomarker study","DasType":"Data"}],"references":{"A1":[{"BRefID":351209,"RR":"<b>Boschker, H.T.S.; Cook, P.L.M.; Polerecky, L.; Eachambadi, R.T.; Lozano, H.; Hidalgo-Martinez, S.; Khalenkow, D.; Spampinato, V.; Claes, N.; Kundu, P.; Wang, D.; Bals, S.; Sand, K.K.; Cavezza, F.; Hauffman, T.; Bjerg, J.T.; Skirtach, A.G.; Kochan, K.; McKee, M.; Wood, B.; Bedolla, D.; Gianoncelli, A.; Geerlings, N.M.J.; Van Gerven, N.; Remaut, H.; Remaut, H.; Geelhoed, J.S.; Millan-Solsona, R.; Fumagalli, L.; Nielsen, L.P.; Franquet, A.; Manca, J.V.; Gomila, G.; Meysman, F.J.R.</b> (2021). Efficient long-range conduction in cable bacteria through nickel protein wires. <i>Nature Comm. 12</i>: 3996. <a href=\"https://dx.doi.org/10.1038/s41467-021-24312-4\" target=\"_blank\">https://dx.doi.org/10.1038/s41467-021-24312-4</a>","AutID":23337,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":351211,"RR":"<b>Eachambadi, R.T.; Boschker, H.T.S.; Franquet, A.; Spampinato, V.; Hidalgo-Martinez, S.; Valcke, R.; Meysman, F.J.R.; Manca, J.V.</b> (2021). Enhanced laterally resolved ToF-SIMS and AFM imaging of the electrically conductive structures in cable bacteria. <i>Anal. Chem. 93(19)</i>: 7226-7234. <a href=\"https://dx.doi.org/10.1021/acs.analchem.1c00298\" target=\"_blank\">https://dx.doi.org/10.1021/acs.analchem.1c00298</a>","AutID":23337,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":351057,"RR":"<b>Geerlings, N.M.J.; Geelhoed, J.S.; Vasquez-Cardenas, D.; Kienhuis, M.V.M.; Hidalgo-Martinez, S.; Boschker, H.T.S.; Middelburg, J.J.; Meysman, F.J.R.; Polerecky, L.</b> (2021). Cell cycle, filament growth and synchronized cell division in multicellular cable bacteria. <i>Front. Microbiol. 12</i>: 620807. <a href=\"https://dx.doi.org/10.3389/fmicb.2021.620807\" target=\"_blank\">https://dx.doi.org/10.3389/fmicb.2021.620807</a>","AutID":23337,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":329965,"RR":"<b>Daggers, T.D.; van Oevelen, D.; Herman, P.M.J.; Boschker, H.T.S.; van der Wal, D.</b> (2020). Spatial variability in macrofaunal diet composition and grazing pressure on microphytobenthos in intertidal areas. <i>Limnol. Oceanogr. 65(11)</i>: 2819-2834. <a href=\"https://dx.doi.org/10.1002/lno.11554\" target=\"_blank\">https://dx.doi.org/10.1002/lno.11554</a>","AutID":23337,"MonDate":null,"AnaDate":2020,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":324256,"RR":"<b>Geerlings, N.M.J.; Karman, C.; Trashin, S.; As, K.S.; Kienhuis, M.V.M.; Hidalgo-Martinez, S.; Vasquez-Cardenas, D.; Boschker, H.T.S.; De Wael, K.; Middelburg, J.J.; Polerecky, L.; Meysman, F.J.R.</b> (2020). Division of labor and growth during electrical cooperation in multicellular cable bacteria. <i>Proc. Natl. Acad. Sci. U.S.A. 117(10)</i>: 5478-5485. <a href=\"https://dx.doi.org/10.1073/pnas.1916244117\" target=\"_blank\">https://dx.doi.org/10.1073/pnas.1916244117</a>","AutID":373464,"MonDate":null,"AnaDate":2020,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":324253,"RR":"<b>Vasquez-Cardenas, D.; Meysman, F.J.R.; Boschker, H.T.S.</b> (2020). A cross‐system comparison of dark carbon fixation in coastal sediments. <i>Global Biogeochem. Cycles 34(2)</i>: e2019GB006298. <a href=\"https://dx.doi.org/10.1029/2019gb006298\" target=\"_blank\">https://dx.doi.org/10.1029/2019gb006298</a>","AutID":23337,"MonDate":null,"AnaDate":2020,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":303624,"RR":"<b>Grosse, J.; Brussaard, C.P.D.; Boschker, H.T.S.</b> (2019). Nutrient limitation driven dynamics of amino acids and fatty acids in coastal phytoplankton. <i>Limnol. Oceanogr. 64(1)</i>: 302-316. <a href=\"https://dx.doi.org/10.1002/lno.11040\" target=\"_blank\">https://dx.doi.org/10.1002/lno.11040</a>","AutID":232339,"MonDate":null,"AnaDate":2019,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":311373,"RR":"<b>Scoma, A.; Heyer, R.; Rifai, R.; Dandyk, C.; Marshall, I.; Kerckhof, F.-M.; Marietou, A.; Boshker, H.T.S.; Meysman, F.J.R.; Malmos, K.G.; Vosegaard, T.; Vermeir, P.; Banat, I.M.; Benndorf, D.; Boon, N.</b> (2019). Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities. <i>ISME J. 13(4)</i>: 1004-1018. <a href=\"https://dx.doi.org/10.1038/s41396-018-0324-5\" target=\"_blank\">https://dx.doi.org/10.1038/s41396-018-0324-5</a>","AutID":377573,"MonDate":null,"AnaDate":2019,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":301256,"RR":"<b>Bjerg, J.T.; Boschker, H.T.S.; Larsen, S.; Berry, D.; Schmid, M.; Millo, D.; Tataru, P.; Meysman, F.J.R.; Wagner, M.; Nielsen, L.P.; Schramm, A.</b> (2018). Long-distance electron transport in individual, living cable bacteria. <i>Proc. Natl. Acad. Sci. U.S.A. 115(22)</i>: 5786-5791. <a href=\"https://dx.doi.org/10.1073/pnas.1800367115\" target=\"_blank\">https://dx.doi.org/10.1073/pnas.1800367115</a>","AutID":23337,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":294198,"RR":"<b>Burian, A.; Grosse, J.; Winder, M.; Boschker, H.T.S.</b> (2018). Nutrient deficiencies and the restriction of compensatory mechanisms in copepods. <i>Funct. Ecol. 32(3)</i>: 636-647. <a href=\"https://doi.org/10.1111/1365-2435.13016\" target=\"_blank\">https://doi.org/10.1111/1365-2435.13016</a>","AutID":232339,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":310416,"RR":"<b>Cornelissen, R.; Bøggild, A.; Eachambadi, R.T.; Koning, R.I.; Kremer, A.; Hidalgo-Martinez, S.; Zetsche, E.M.; Damgaard, L.R.; Bonné, R.; Drijkoningen, J.; Geelhoed, J.S.; Boesen, T.; Boschker, H.T.S.; Valcke, R.; Nielsen, L.P.; D'Haen, J.; Manca, J.V.; Meysman, F.J.R.</b> (2018). The cell envelope structure of cable bacteria. <i>Front. Microbiol. 9</i>: 13. <a href=\"https://dx.doi.org/10.3389/fmicb.2018.03044\" target=\"_blank\">https://dx.doi.org/10.3389/fmicb.2018.03044</a>","AutID":373464,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":295448,"RR":"<b>Moerdijk-Poortvliet, T.C.W.; Beauchard, O.; Stal, L.J.; Boschker, H.T.S.</b> (2018). Production and consumption of extracellular polymeric substances in an intertidal diatom mat. <i>Mar. Ecol. Prog. Ser. 592</i>: 77-95. <a href=\"https://dx.doi.org/10.3354/meps12481\" target=\"_blank\">https://dx.doi.org/10.3354/meps12481</a>","AutID":232339,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":295460,"RR":"<b>Moerdijk-Poortvliet, T.C.W.; van Breugel, P.; Sabbe, K.; Beauchard, O.; Stal, L.J.; Boschker, H.T.S.</b> (2018). Seasonal changes in the biochemical fate of carbon fixed by benthic diatoms in intertidal sediments. <i>Limnol. Oceanogr. 63(2)</i>: 550-569. <a href=\"https://dx.doi.org/10.1002/lno.10648\" target=\"_blank\">https://dx.doi.org/10.1002/lno.10648</a>","AutID":232339,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":300386,"RR":"<b>Vasquez Cardenas, D.; Meire, L.; Sørensen, H.L.; Glud, R.N.; Meysman, F.J.R.; Boschker, H.T.S.</b> (2018). Bacterial chemoautotrophic reoxidation in sub-Arctic sediments: a seasonal study in Kobbefjord, Greenland. <i>Mar. Ecol. Prog. Ser. 601</i>: 33-39. <a href=\"https://doi.org/10.3354/meps12669\" target=\"_blank\">https://doi.org/10.3354/meps12669</a>","AutID":23337,"MonDate":null,"AnaDate":2018,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":284166,"RR":"<b>Burdorf, L.D.W.; Tramper, A.; Seitaj, D.; Meire, L.; Hidalgo-Martinez, S.; Zetsche, E.-M.; Boschker, H.T.S.; Meysman, F.J.R.</b> (2017). Long-distance electron transport occurs globally in marine sediments. <i>Biogeosciences 14(3)</i>: 683-701. <a href=\"https://dx.doi.org/10.5194/bg-14-683-2017\" target=\"_blank\">https://dx.doi.org/10.5194/bg-14-683-2017</a>","AutID":232339,"MonDate":null,"AnaDate":2017,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":287868,"RR":"<b>Grosse, J.; Burson, A.; Stomp, M.; Huisman, J.; Boschker, H.T.S.</b> (2017). From Ecological Stoichiometry to Biochemical Composition: Variation in N and P Supply Alters Key Biosynthetic Rates in Marine Phytoplankton. <i>Front. Microbiol. 8</i>: 1299. <a href=\"https://dx.doi.org/10.3389/fmicb.2017.01299\" target=\"_blank\">https://dx.doi.org/10.3389/fmicb.2017.01299</a>","AutID":232339,"MonDate":null,"AnaDate":2017,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":282845,"RR":"<b>Grosse, J.; van Breugel, P.; Brussaard, C.P.D.; Boschker, H.T.S.</b> (2017). A biosynthesis view on nutrient stress in coastal phytoplankton. <i>Limnol. Oceanogr. 62(2)</i>: 490-506. <a href=\"https://dx.doi.org/10.1002/lno.10439\" target=\"_blank\">https://dx.doi.org/10.1002/lno.10439</a>","AutID":232339,"MonDate":null,"AnaDate":2017,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":285937,"RR":"<b>Lipsewers, Y.A.; Vasquez Cardenas, D.; Seitaj, D.; Schauer, R.; Hidalgo-Martinez, S.; Sinninghe Damsté, J.S.; Meysman, F.J.R.; Villanueva, L.; Boschker, H.T.S.</b> (2017). Impact of seasonal hypoxia on activity and community structure of chemolithoautotrophic bacteria in a coastal sediment. <i>Appl. Environ. Microbiol. 83(10)</i>: e03517-16. <a href=\"https://dx.doi.org/10.1128/aem.03517-16\" target=\"_blank\">https://dx.doi.org/10.1128/aem.03517-16</a>","AutID":258747,"MonDate":null,"AnaDate":2017,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":260916,"RR":"<b>Pascal, P.-Y.; Gros, O.; Boschker, H.T.S.</b> (2016). Temporal fluctuations in the trophic role of large benthic sulfur bacteria in mangrove sediment. <i>Food Webs 7</i>: 20-28. <a href=\"http://dx.doi.org/10.1016/j.fooweb.2016.04.001\" target=\"_blank\">dx.doi.org/10.1016/j.fooweb.2016.04.001</a>","AutID":232339,"MonDate":null,"AnaDate":2016,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":259125,"RR":"<b>Vasquez Cardenas, D.; Organo Quintana, C.; Meysman, F.J.R.; Kristensen, E.; Boschker, H.T.S.</b> (2016). Species-specific effects of two bioturbating polychaetes on sediment chemoautotrophic bacteria. <i>Mar. Ecol. Prog. Ser. 549</i>: 55-68. <a href=\"http://dx.doi.org/10.3354/meps11679\" target=\"_blank\">dx.doi.org/10.3354/meps11679</a>","AutID":232339,"MonDate":null,"AnaDate":2016,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":248971,"RR":"<b>Grosse, J.; Van Breugel, P.; Boschker, H.T.S.</b> (2015). Tracing carbon fixation in phytoplankton—compound specific and total <sup>13</sup>C incorporation rates. <i>Limnol. Oceanogr., Methods 13(6)</i>: 288-302. <a href=\"http://dx.doi.org/10.1002/lom3.10025\" target=\"_blank\">dx.doi.org/10.1002/lom3.10025</a>","AutID":185593,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":241437,"RR":"<b>Koopmans, M.; van Rijswijk, P.; Boschker, H.T.S.; Houtekamer, M.; Martens, D.; Wijffels, R.H.</b> (2015). Seasonal Variation of Fatty Acids and Stable Carbon Isotopes in Sponges as Indicators for Nutrition: Biomarkers in Sponges Identified. <i>Mar. Biotechnol. 17(1)</i>: 43-54. <a href=\"http://dx.doi.org/10.1007/s10126-014-9594-8\" target=\"_blank\">dx.doi.org/10.1007/s10126-014-9594-8</a>","AutID":170832,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":249147,"RR":"<b>Moerdijk-Poortvliet, T.C.W.; Schierbeek, H.; Houtekamer, M.; van Engeland, T.; Derrien, D.; Stal, L.J.; Boschker, H.T.S.</b> (2015). Comparison of gas chromatography/isotope ratio mass spectrometry and liquid chromatography/isotope ratio mass spectrometry for carbon stable-isotope analysis of carbohydrates. <i>Rapid Comm. Mass Spectrom. 29</i>: 1205-1214. <a href=\"http://dx.doi.org/10.1002/rcm.7217\" target=\"_blank\">dx.doi.org/10.1002/rcm.7217</a>","AutID":185593,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":247848,"RR":"<b>Pascal, P.-Y.; Bellemare, C.; Sterrer, W.; Boschker, H.T.S.; Gonzalez-Rizzo, S.; Gros, O.</b> (2015). Diet of <i>Haplognathia ruberrima</i> (Gnathostomulida) in a Caribbean marine mangrove. <i>Mar. Ecol. (Berl.) 36</i>: 246-257. <a href=\"http://dx.doi.org/10.1111/maec.12296\" target=\"_blank\">dx.doi.org/10.1111/maec.12296</a>","AutID":185663,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":250699,"RR":"<b>Steger, K.; Premke, K.; Gudasz, C.; Boschker, H.T.S.; Tranvik, L.J.</b> (2015). Comparative study on bacterial carbon sources in lake sediments: the role of methanotrophy. <i>Aquat. Microb. Ecol. 76</i>: 39–47. <a href=\"http://dx.doi.org/10.3354/ame01766\" target=\"_blank\">dx.doi.org/10.3354/ame01766</a>","AutID":202217,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":249836,"RR":"<b>Vasquez-Cardenas, D.; van de Vossenberg, J.; Polerecky, L.; Malkin, S.Y.; Schauer, R.; Hidalgo-Martinez, S.; Confurius-Guns, V.; Middelburg, J.J.; Meysman, F.J.R.; Boschker, H.T.S.</b> (2015). Microbial carbon metabolism associated with electrogenic sulphur oxidation in coastal sediments. <i>ISME J. 9(9)</i>: 1966-1978. <a href=\"http://dx.doi.org/10.1038/ismej.2015.10\" target=\"_blank\">dx.doi.org/10.1038/ismej.2015.10</a>","AutID":185663,"MonDate":null,"AnaDate":2015,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":241141,"RR":"<b>Boschker, H.T.S.; Vasquez-Cardenas, D.; Bolhuis, H.; Moerdijk-Poortvliet, T.C.W.; Moodley, L.</b> (2014). Chemoautotrophic Carbon Fixation Rates and Active Bacterial Communities in Intertidal Marine Sediments. <i>PLoS One 9(7)</i>: e101443 1-12. <a href=\"http://dx.doi.org/10.1371/journal.pone.0101443\" target=\"_blank\">http://dx.doi.org/10.1371/journal.pone.0101443</a>","AutID":185593,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":241119,"RR":"<b>Derrien, D.; Plain, C.; Courty, P.-E.; Gelhage, L.; Moerdijk-Poortvliet, T.C.W.; Thomas, F; Versini, A.; Zeller, B.; Koutika, L.-S.; Boschker, H.T.S.; Epron, D.</b> (2014). Does the addition of labile substrate destabilise old soil organic matter? <i>Soil Biol. Biochem. 76</i>: 149-160. <a href=\"http://dx.doi.org/10.1016/j.soilbio.2014.04.030\" target=\"_blank\">http://dx.doi.org/10.1016/j.soilbio.2014.04.030</a>","AutID":185593,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":239947,"RR":"<b>Kunihiro, T.; Veuger, B.; Vasquez Cardenas, D.; Pozzato, L.; Le Guitton, M.; Moriya, K.; Kuwae, M.; Omori, K.; Boschker, H.T.S.; Van Oevelen, D.</b> (2014). Phospholipid-Derived Fatty Acids and Quinones as Markers for Bacterial Biomass and Community Structure in Marine Sediments. <i>PLoS One 9(4)</i>:  e96219. <a href=\"http://dx.doi.org/10.1371/journal.pone.0096219\" target=\"_blank\">dx.doi.org/10.1371/journal.pone.0096219</a>","AutID":232339,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":234748,"RR":"<b>Malkin, S.Y.; Rao, A.M.F.; Seitaj, D.; Vasquez-Cardenas, D.; Zetsche, E.-M.; Hidalgo-Martinez, S.; Boschker, H.T.S.; Meysman, F.J.R.</b> (2014). Natural occurrence of microbial sulphur oxidation by long-range electron transport in the seafloor. <i>ISME J. 8(9)</i>: 1843–1854. <a href=\"https://dx.doi.org/10.1038/ismej.2014.41\" target=\"_blank\">https://dx.doi.org/10.1038/ismej.2014.41</a>","AutID":166999,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":241264,"RR":"<b>Miyatake, T.; Moerdijk-Poortvliet, T.C.W.; Stal, L.J.; Boschker, H.T.S.</b> (2014). Tracing carbon flow from microphytobenthos to major bacterial groups in an intertidal marine sediment by using an in situ <super>13</super>C pulse-chase method. <i>Limnol. Oceanogr. 59(4)</i>: 1275-1287. <a href=\"http://dx.doi.org/10.4319/lo.2014.59.4.1275\" target=\"_blank\">http://dx.doi.org/10.4319/lo.2014.59.4.1275</a>","AutID":170832,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":239905,"RR":"<b>Moerdijk-Poortvliet, T.C.W.; Brasser, J.; de Ruiter, G.; Houtekamer, M.; Bolhuis, H.; Stal, L.J.; Boschker, H.T.S.</b> (2014). A versatile method for simultaneous stable carbon isotope analysis of DNA and RNA nucleotides by liquid chromatography/isotope ratio mass spectrometry. <i>Rapid Comm. Mass Spectrom. 28(12)</i>: 1401-1411. <a href=\"http://dx.doi.org/10.1002/rcm.6919\" target=\"_blank\">dx.doi.org/10.1002/rcm.6919</a>","AutID":170832,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":242574,"RR":"<b>Moerdijk-Poortvliet, T.C.W.; Stal, L.J.; Boschker, H.T.S.</b> (2014). LC/IRMS analysis: A powerful technique to trace carbon flow in microphytobenthic communities in intertidal sediments. <i>J. Sea Res. 92</i>: 19–25. <a href=\"http://dx.doi.org/10.1016/j.seares.2013.10.002\" target=\"_blank\">dx.doi.org/10.1016/j.seares.2013.10.002</a>","AutID":185593,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":244102,"RR":"<b>Pascal, P.-Y.; Dubois, S.; Boschker, H.T.S.; Gros, O.</b> (2014). Trophic role of large benthic sulfur bacteria in mangrove sediment . <i>Mar. Ecol. Prog. Ser. 516</i>: 127-138 . <a href=\"http://dx.doi.org/10.3354/meps11035 \" target=\"_blank\">dx.doi.org/10.3354/meps11035 </a>","AutID":166999,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":243750,"RR":"<b>Prenafeta Boldú, F.X.; Summerbell, R.C.; de Boer, W.; Boschker, H.T.S.; Gamsformerly, W.</b> (2014). Biodiversity and ecology of soil fungi in a primary succession of a temperate coastal dune system. <i>Nova Hedwigia 99(3-4)</i>: 347-372. <a href=\"http://dx.doi.org/10.1127/0029-5035/2014/0203\" target=\"_blank\">dx.doi.org/10.1127/0029-5035/2014/0203</a>","AutID":185593,"MonDate":null,"AnaDate":2014,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":230888,"RR":"<b>Drigo, B.; Kowalchuk, G.A.; Knapp, B.A.; Pijl, A.S.; Boschker, H.T.S.; van Veen, J.A.</b> (2013). Impacts of 3 years of elevated atmospheric CO<sub>2</sub> on rhizosphere carbon flow and microbial community dynamics. <i>Glob. Chang. Biol. 19(2)</i>: 621-636. <a href=\"http://dx.doi.org/10.1111/gcb.12045\" target=\"_blank\">dx.doi.org/10.1111/gcb.12045</a>","AutID":185663,"MonDate":null,"AnaDate":2013,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":240554,"RR":"<b>Labrenz, M.; Grote, J.; Mammitzsch, K.; Boschker, H.T.S.; Laue, M.; Jost, G.; Glaubitz, S.; Jürgens, K.</b> (2013). Sulfurimonas gotlandica sp. nov., a chemoautotrophic and psychrotolerantepsilonproteobacterium isolated from a pelagicredoxcline, and an emended description of the genus Sulfurimonas. <i>Int. J. Syst. Evol. Microbiol. 63</i>: 4141–4148. <a href=\"http://dx.doi.org/10.1099/ijs.0.048827-0\" target=\"_blank\">http://dx.doi.org/10.1099/ijs.0.048827-0</a>","AutID":186498,"MonDate":null,"AnaDate":2013,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":230948,"RR":"<b>Miyatake, T.; MacGregor, B.J.; Boschker, H.T.S.</b> (2013). Depth-Related Differences in Organic Substrate Utilization by Major Microbial Groups in Intertidal Marine Sediment. <i>Appl. Environ. Microbiol. 79(1)</i>: 389-392. <a href=\"http://dx.doi.org/10.1128/AEM.02027-12\" target=\"_blank\">dx.doi.org/10.1128/AEM.02027-12</a>","AutID":170832,"MonDate":null,"AnaDate":2013,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":230942,"RR":"<b>Pascal, P.-Y.; Fleeger, J.W.; Boschker, H.T.S.; Mitwally, H.M.; Johnson, D.S.</b> (2013). Response of the benthic food web to short- and long-term nutrient enrichment in saltmarsh mudflats. <i>Mar. Ecol. Prog. Ser. 474</i>: 27-41. <a href=\"http://dx.doi.org/10.3354/meps10090\" target=\"_blank\">dx.doi.org/10.3354/meps10090</a>","AutID":183740,"MonDate":null,"AnaDate":2013,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":221507,"RR":"<b>Van Oostende, N.; Moerdijk-Poortvliet, T.C.W.; Boschker, H.T.S.; Vyverman, W.; Sabbe, K.</b> (2013). Release of dissolved carbohydrates by <i>Emiliania huxleyi</i> and formation of transparent exopolymer particles depend on algal life cycle and bacterial activity. <i>Environ. Microbiol. 15(5)</i>: 1514-1531. <a href=\"http://dx.doi.org/10.1111/j.1462-2920.2012.02873.x\" target=\"_blank\">http://dx.doi.org/10.1111/j.1462-2920.2012.02873.x</a>","AutID":186498,"MonDate":null,"AnaDate":2013,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":231092,"RR":"<b>Hannula, S.E.; Boschker, H.T.S.; de Boer, W.; van Veen, J.A.</b> (2012). <sup>13</sup>C pulse-labeling assessment of the community structure of active fungi in the rhizosphere of a genetically starch-modified potato (<i>Solanum tuberosum</i>) cultivar and its parental isoline. <i>New Phytol. 194(3)</i>: 784-799. <a href=\"http://dx.doi.org/10.1111/j.1469-8137.2012.04089.x\" target=\"_blank\">dx.doi.org/10.1111/j.1469-8137.2012.04089.x</a>","AutID":171620,"MonDate":null,"AnaDate":2012,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":196220,"RR":"<b>Dijkman, N.A.; Boschker, H.T.S.; Stal, L.J.; Kromkamp, J.C.</b> (2010). Composition and heterogeneity of the microbial community in a coastal microbial mat as revealed by the analysis of pigments and phospholipid-derived fatty acids. <i>J. Sea Res. 63(1)</i>: 62-70. <a href=\"http://dx.doi.org/10.1016/j.seares.2009.10.002\" target=\"_blank\">http://dx.doi.org/10.1016/j.seares.2009.10.002</a>","AutID":304136,"MonDate":null,"AnaDate":2010,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":217483,"RR":"<b>Dijkman, N.A.; Boschker, H.T.S.; Middelburg, J.J.; Kromkamp, J.C.</b> (2009). Group-specific primary production based on stable-isotope labeling of phospholipid-derived fatty acids. <i>Limnol. Oceanogr., Methods 7</i>: 612-625. <a href=\"http://dx.doi.org/10.4319/lom.2009.7.612\" target=\"_blank\">dx.doi.org/10.4319/lom.2009.7.612</a>","AutID":174317,"MonDate":null,"AnaDate":2009,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":217480,"RR":"<b>Gribsholt, B.; Veuger, B.; Tramper, A.; Middelburg, J.J.; Boschker, H.T.S.</b> (2009). Long-term <sup>15</sup>N-nitrogen retention in tidal freshwater marsh sediment: elucidating the microbial contribution. <i>Limnol. Oceanogr. 54(1)</i>: 13-22. <a href=\"https://dx.doi.org/10.4319/lo.2009.54.1.0013\" target=\"_blank\">https://dx.doi.org/10.4319/lo.2009.54.1.0013</a>","AutID":23337,"MonDate":null,"AnaDate":2009,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":141630,"RR":"<b>Miyatake, T.; MacGregor, B.J.; Boschker, E.</b> (2009). Linking microbial community function to phylogeny of sulfate-reducing <i>Deltaproteobacteria</i> in marine sediments by combining stable isotope probing with magnetic-bead capture hybridization of 16S rRNA. <i>Appl. Environ. Microbiol. 75(15)</i>: 4927-4935. <a href=\"https://dx.doi.org/10.1128/AEM.00652-09\" target=\"_blank\">https://dx.doi.org/10.1128/AEM.00652-09</a>","AutID":37655,"MonDate":null,"AnaDate":2009,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":316968,"RR":"<b>Caramujo, M.J.; Boschker, H.T.S.; Admiraal, W.</b> (2008). Fatty acid profiles of algae mark the development and composition of harpacticoid copepods. <i>Freshwat. Biol. 53(1)</i>: 77-90. <a href=\"https://dx.doi.org/10.1111/j.1365-2427.2007.01868.x\" target=\"_blank\">https://dx.doi.org/10.1111/j.1365-2427.2007.01868.x</a>","AutID":23337,"MonDate":null,"AnaDate":2008,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":317001,"RR":"<b>Drigo, B.; Kowalchuk, G.A.; Yergeau, E.; Bezemer, T.M.; Boschker, H.T.S.; van Veen, J.A.</b> (2007). Impact of elevated carbon dioxide on the rhizosphere communities of <i>Carex arenaria</i> and <i>Festuca rubra</i>. <i>Glob. Chang. Biol. 13(11)</i>: 2396-2410. <a href=\"https://dx.doi.org/10.1111/j.1365-2486.2007.01445.x\" target=\"_blank\">https://dx.doi.org/10.1111/j.1365-2486.2007.01445.x</a>","AutID":23337,"MonDate":null,"AnaDate":2007,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":293858,"RR":"<b>Gribsholt, B.; Struyf, E.; Tramper, A.; De Brabandere, L.; Brion, N.; van Damme, S.; Meire, P.; Dehairs, F.; Middelburg, J.J.; Boschker, H.T.S.</b> (2007). Nitrogen assimilation and short term retention in a nutrient-rich tidal freshwater marsh - a whole ecosystem <sup>15</sup>N enrichment study. <i>Biogeosciences 4(1)</i>: 11-26. <a href=\"https://dx.doi.org/10.5194/bg-4-11-2007\" target=\"_blank\">https://dx.doi.org/10.5194/bg-4-11-2007</a>","AutID":23337,"MonDate":null,"AnaDate":2007,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":99150,"RR":"<b>Bouillon, S.; Boschker, H.T.S.</b> (2006). Bacterial carbon sources in coastal sediments: a cross-system analysis based on stable isotope data of biomarkers. <i>Biogeosciences 3(2)</i>: 175-185 + suppl.","AutID":23337,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":142105,"RR":"<b>Gribsholt, B.; Struyf, E.; Tramper, A.; Andersson, M.G.I.; Brion, N.; De Brabandere, L.; Van Damme, S.; Meire, P.; Middelburg, J.J.; Dehairs, F.A.; Boschker, H.T.S.</b> (2006). Ammonium transformation in a nitrogen-rich tidal freshwater marsh. <i>Biogeochemistry 80(3)</i>: 289-298","AutID":23337,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":317023,"RR":"<b>Huiskes, A.H.L.; Boschker, H.T.S.; Lud, D.; Moerdijk-Poortvliet, T.C.W.</b> (2006). Stable isotope ratios as a tool for assessing changes in carbon and nutrient sources in Antarctic terrestrial ecosystems. <i>Plant Ecology 182(1-2)</i>: 79-86. <a href=\"https://dx.doi.org/10.1007/s11258-005-9032-0\" target=\"_blank\">https://dx.doi.org/10.1007/s11258-005-9032-0</a>","AutID":202217,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":317053,"RR":"<b>MacGregor, B.J.; Boschker, H.T.S.; Amann, R.</b> (2006). Comparison of rRNA and polar-lipid-derived fatty acid biomarkers for assessment of <sup>13</sup>C-substrate incorporation by microorganisms in marine sediments. <i>Appl. Environ. Microbiol. 72(8)</i>: 5246-5253. <a href=\"https://dx.doi.org/10.1128/aem.00423-06\" target=\"_blank\">https://dx.doi.org/10.1128/aem.00423-06</a>","AutID":23337,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":102048,"RR":"<b>Struyf, E.; Dausse, A.; Van Damme, S.; Bal, K.; Gribsholt, B.; Boschker, E.; Middelburg, J.; Meire, P.</b> (2006). Tidal marshes and biogenic silica recycling at the land-sea interface. <i>Limnol. Oceanogr. 51(2)</i>: 838-846. <a href=\"https://dx.doi.org/10.4319/lo.2006.51.2.0838\" target=\"_blank\">https://dx.doi.org/10.4319/lo.2006.51.2.0838</a>","AutID":37655,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":317549,"RR":"<b>van der Wal, A.; van Veen, J.A.; Smant, W.; Boschker, H.T.S.; Bloem, J.; Kardol, P.; van der Putten, W.H.; de Boer, W.</b> (2006). Fungal biomass development in a chronosequence of land abandonment. <i>Soil Biol. Biochem. 38(1)</i>: 51-60. <a href=\"https://dx.doi.org/10.1016/j.soilbio.2005.04.017\" target=\"_blank\">https://dx.doi.org/10.1016/j.soilbio.2005.04.017</a>","AutID":23337,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":225710,"RR":"<b>Veuger, B.; van Oevelen, D.; Boschker, H.T.S.; Middelburg, J.J.</b> (2006). Fate of peptidoglycan in an intertidal sediment: An in situ <sup>13</sup>C-labeling study. <i>Limnol. Oceanogr. 51(4)</i>: 1572-1580. <a href=\"http://dx.doi.org/10.4319/lo.2006.51.4.1572\" target=\"_blank\">http://dx.doi.org/10.4319/lo.2006.51.4.1572</a>","AutID":23337,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":317560,"RR":"<b>Yergeau, E.; Bokhorst, S.; Huiskes, A.H.L.; Boschker, H.T.S.; Aerts, R.; Kowalchuk, G.A.</b> (2006). Size and structure of bacterial, fungal and nematode communities along an Antarctic environmental gradient. <i>FEMS Microbiol. Ecol. 59(2)</i>: 436-451. <a href=\"https://dx.doi.org/10.1111/j.1574-6941.2006.00200.x\" target=\"_blank\">https://dx.doi.org/10.1111/j.1574-6941.2006.00200.x</a>","AutID":23337,"MonDate":null,"AnaDate":2006,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":75754,"RR":"<b>Boschker, H.T.S.; Kromkamp, J.C.; Middelburg, J.J.</b> (2005). Biomarker and carbon isotopic constraints on bacterial and algal community structure and functioning in a turbid, tidal estuary. <i>Limnol. Oceanogr. 50(1)</i>: 70-80. <a href=\"https://dx.doi.org/10.4319/lo.2005.50.1.0070\" target=\"_blank\">https://dx.doi.org/10.4319/lo.2005.50.1.0070</a>","AutID":177320,"MonDate":null,"AnaDate":2005,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":78092,"RR":"<b>Gribsholt, B.; Boschker, H.T.S.; Struyf, E.; Andersson, M.; Tramper, A.; De Brabandere, L.; Van Damme, S.; Brion, N.; Meire, P.; Dehairs, F.; Middelburg, J.J.; Heip, C.H.R.</b> (2005). Nitrogen processing in a tidal freshwater marsh: a whole-ecosystem <sup>15</sup>N labeling study. <i>Limnol. Oceanogr. 50(6)</i>: 1945-1959. <a href=\"http://dx.doi.org/10.4319/lo.2005.50.6.1945\" target=\"_blank\">dx.doi.org/10.4319/lo.2005.50.6.1945</a>","AutID":23337,"MonDate":null,"AnaDate":2005,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":75506,"RR":"<b>Moodley, L.; Middelburg, J.J.; Soetaert, K.; Boschker, H.T.S.; Herman, P.M.J.; Heip, C.H.R.</b> (2005). Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments. <i>J. Mar. Res. 63(2)</i>: 457-469","AutID":23337,"MonDate":null,"AnaDate":2005,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":75194,"RR":"<b>Veuger, B.; Middelburg, J.J.; Boschker, H.T.S.; Houtekamer, M.</b> (2005). Analysis of <sup>15</sup>N incorporation into D-alanine: a new method for tracing nitrogen uptake by bacteria. <i>Limnol. Oceanogr., Methods 3</i>: 230-240","AutID":23337,"MonDate":null,"AnaDate":2005,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":68182,"RR":"<b>Rochelle-Newall, E.; Pizay, M.D.; Middelburg, J.J.; Boschker, H.T.S.; Gattuso, J.P.</b> (2004). Degradation of riverine dissolved organic matter by seawater bacteria. <i>Aquat. Microb. Ecol. 37</i>: 9-22","AutID":23337,"MonDate":null,"AnaDate":2004,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":64342,"RR":"<b>Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P.; Boschker, H.T.S.; Heip, C.H.R.</b> (2004). Carbon-nitrogen coupling and algal-bacterial interactions during an experimental bloom: modeling a <sup>13</sup>C tracer experiment. <i>Limnol. Oceanogr. 49(3)</i>: 862-878. <a href=\"https://dx.doi.org/10.4319/lo.2004.49.3.0862\" target=\"_blank\">https://dx.doi.org/10.4319/lo.2004.49.3.0862</a>","AutID":23337,"MonDate":null,"AnaDate":2004,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":76298,"RR":"<b>Veuger, B.; Middelburg, J.J.; Boschker, H.T.S.; Nieuwenhuize, J.; Van Rijswijk, P.; Rochelle-Newall, E.J.; Navarro, N.</b> (2004). Microbial uptake of dissolved organic and inorganic nitrogen in Randers Fjord. <i>Est., Coast. and Shelf Sci. 61(3)</i>: 507-515. <a href=\"https://dx.doi.org/10.1016/j.ecss.2004.06.014\" target=\"_blank\">https://dx.doi.org/10.1016/j.ecss.2004.06.014</a>","AutID":23337,"MonDate":null,"AnaDate":2004,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":25354,"RR":"<b>Boschker, H.T.S.; Middelburg, J.J.</b> (2002). Mini review: stable isotopes and biomarkers in microbial ecology. <i>FEMS Microbiol. Ecol. 40(2)</i>: 85-95","AutID":23337,"MonDate":null,"AnaDate":2002,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":75158,"RR":"<b>Boschker, H.T.S.; Middelburg, J.J.</b> (2002). Stable isotopes and biomarkers in microbial ecology. <i>FEMS Microbiol. Ecol. 40</i>: 85-95","AutID":177320,"MonDate":null,"AnaDate":2002,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":119902,"RR":"<b>de Bie, M.J.M.; Starink, M.; Boschker, H.T.S.; Peene, J.J.; Laanbroek, H.J.</b> (2002). Nitrification in the Schelde estuary: methodological aspects and factors influencing its activity. <i>FEMS Microbiol. Ecol. 42(1)</i>: 99-107. <a href=\"https://dx.doi.org/10.1111/j.1574-6941.2002.tb00999.x\" target=\"_blank\">https://dx.doi.org/10.1111/j.1574-6941.2002.tb00999.x</a>","AutID":23337,"MonDate":null,"AnaDate":2002,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":195854,"RR":"<b>Moodley, L.; Middelburg, J.J.; Boschker, H.T.S.; Duineveld, G.C.A.; Pel, R.; Herman, P.M. J.; Heip, C.H.R.</b> (2002). Bacteria and foraminifera: Key players in a short-term deep-sea benthic response to phytodetritus. <i>Mar. Ecol. Prog. Ser. 236</i>: 23-29","AutID":23337,"MonDate":null,"AnaDate":2002,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":195860,"RR":"<b>Moodley, L.; Middelburg, J.J.; Boschker, H.T.S.; Duineveld, G.C.A.; Pel, R.; Herman, P.M.J.; Heip, C.H.R.</b> (2002). Erratum: Bacteria and foraminifera: Key players in a short-term deep-sea benthic response to phytodetritus. <i>Mar. Ecol. Prog. Ser. 239</i>: 230","AutID":23337,"MonDate":null,"AnaDate":2002,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":31677,"RR":"<b>Boschker, H.T.S.; Wielemaker, A.; Schaub, B.E.M.; Holmer, M.</b> (2000). Limited coupling of macrophyte production and bacterial carbon cycling in the sediments of <i>Zostera</i> spp. meadows. <i>Mar. Ecol. Prog. Ser. 203</i>: 181-189. <a href=\"https://dx.doi.org/10.3354/meps203181\" target=\"_blank\">https://dx.doi.org/10.3354/meps203181</a>","AutID":23337,"MonDate":null,"AnaDate":2000,"PeerRev":1,"outputType":"1_A1","OpenAcc":0},{"BRefID":7389,"RR":"<b>Middelburg, J.J.; Barranguet, C.; Boschker, H.T.S.; Herman, P.M.J.; Moens, T.; Heip, C.H.R.</b> (2000). The fate of intertidal microphytobenthos carbon: an in situ <sup>13</sup>C-labeling study. <i>Limnol. Oceanogr. 45(6)</i>: 1224-1234. <a href=\"http://dx.doi.org/10.4319/lo.2000.45.6.1224\" target=\"_blank\">http://dx.doi.org/10.4319/lo.2000.45.6.1224</a>","AutID":23337,"MonDate":null,"AnaDate":2000,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":31683,"RR":"<b>Moodley, L.; Boschker, H.T.S.; Middelburg, J.J.; Pel, R.; Herman, P.M.J.; de Deckere, E.; Heip, C.H.R.</b> (2000). Ecological significance of benthic foraminifera: <sup>13</sup>C labelling experiments. <i>Mar. Ecol. Prog. 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