{"personrec":{"StatusID":1,"PersStatus":null,"Status":"Valid","PersID":37981,"PersName":"Koenen, Michel","PublicFlag":1,"CheckedFlag":0,"Surname":"Koenen","Firstname":"Michel","Initials":"M.","AddressedAs":null,"Function":null,"DateLastModified":{"date":"2023-05-02 10:08:18.393000","timezone_type":1,"timezone":"+00:00"},"PersTitle":null,"PersStatusID":null,"AbstractEnglish":null,"AbstractOtherLang":null,"AbstractLangCode":null,"AbstractLangID":null,"AutID":390736,"ND":"2019-09-02","UD":"2019-09-02"},"loaninfo":null,"pictures":[],"institutes":[{"instituterec":{"OrderNr":1,"Acronym":"MMB","ENFunction":"Research Assistant","InsIDtmp":13655,"OrigNameLangCode":null,"OrigNameLangID":null,"FullOrigName":null,"InsID":13655,"Function":"Research Assistant","BeginDay":null,"BeginMonth":null,"BeginYear":null,"Begindate":"","Enddate":"","PIAdrID":162583,"AdrID":null,"Line1":null,"Line2":null,"Line3":null,"Line4":null,"Phone":"+31-(0)222-36 95 83","GSM":null,"Email":"michel.koenen@nioz.nl","EnvName":null,"EncAddress":"","FullStandardName":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry","DirectorFlag":null,"MarineSciFlag":null,"SpecializedFlag":null},"parent":null,"institutes":null,"references":null,"conferences":null,"datasets":null,"persons":null,"pastpers":null,"subpers":null,"projects":null,"urls":null,"pictures":null,"published":null,"affrefs":null,"collections":null,"thesterms":null,"taxterms":null,"geoterms":null,"thestermsFRIS":null,"nXtins":null,"previns":null,"spcols":null,"resmessage":"no id specified","complete":0,"participantrec":null,"peerrevs":null,"urlmaps":null}],"pastins":[],"projects":[],"datasets":null,"references":{"A1":[{"BRefID":437314,"RR":"<b>Bale, N.J.; Fujimura, H.; Pjevac, P.; Koenen, M.; Ikeda, H.; Itagaki, S.; Yamamoto, Y.; Palmetzhofer, J.; Sedlacek, C.J.; Palabikyan, H.; Sinninghe Damsté, J.S; Wagner, M.; Shiigi, H.; Daims, H.</b> (2025). Unusual plastoquinones in non‐phototrophic nitrifying bacteria. <i>Environmental Microbiology Reports 17(4)</i>: e70174. <a href=\"https://dx.doi.org/10.1111/1758-2229.70174\" target=\"_blank\">https://dx.doi.org/10.1111/1758-2229.70174</a>","AutID":390736,"MonDate":null,"AnaDate":2025,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":437662,"RR":"<b>Bale, N.J.; Koenen, M.; Ding, S.; Sinninghe Damsté, J.S</b> (2025). N-glyceroyl alkylamine phosphoglycolipids dominate the lipidome of several Bacillota bacteria. <i>Syst. Appl. Microbiol. 48(4)</i>: 126609. <a href=\"https://dx.doi.org/10.1016/j.syapm.2025.126609\" target=\"_blank\">https://dx.doi.org/10.1016/j.syapm.2025.126609</a>","AutID":390736,"MonDate":null,"AnaDate":2025,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":437664,"RR":"<b>Sinninghe Damsté, J.S; Koenen, M.; Thiel, V.; Richter, N.; Hopmans, E.C.; Bale, N.J.</b> (2025). A comprehensive study of biohopanoid production in <i>Alphaproteobacteria</i> : biosynthetic, chemotaxonomical, and geobiological implications. <i>Geobiol. 23(6)</i>: e70038. <a href=\"https://dx.doi.org/10.1111/gbi.70038\" target=\"_blank\">https://dx.doi.org/10.1111/gbi.70038</a>","AutID":390736,"MonDate":null,"AnaDate":2025,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":437380,"RR":"<b>Sorokin, D.Y.; Merkel, A.Y.; Bale, N.J.; Koenen, M.; Sinninghe Damsté, J.S; Marturano, L.; Messina, E.; La Cono, V.; Yakimov, M.M.</b> (2025). Natronomicrosphaera hydrolytica, gen. nov., sp. nov., a first representative of the phylum Planctomycetota from soda lakes. <i>Syst. Appl. Microbiol. 48(3)</i>: 126608. <a href=\"https://dx.doi.org/10.1016/j.syapm.2025.126608\" target=\"_blank\">https://dx.doi.org/10.1016/j.syapm.2025.126608</a>","AutID":390736,"MonDate":null,"AnaDate":2025,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":392723,"RR":"<b>Egas, R.A.; Sahonero Canavesi, D.; Bale, N.J.; Koenen, M.; Yildiz, C.; Villanueva, L.; Sousa, D.Z.; Sánchez-Andrea, I.</b> (2024). Acetic acid stress response of the acidophilic sulfate reducer <i>Acididesulfobacillus acetoxydans</i>. <i>Environ. Microbiol. 26(2)</i>: e16565. <a href=\"https://dx.doi.org/10.1111/1462-2920.16565\" target=\"_blank\">https://dx.doi.org/10.1111/1462-2920.16565</a>","AutID":390736,"MonDate":null,"AnaDate":2024,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":404460,"RR":"<b>Golyshina, O.V.; Lunev, E.A.; Distaso, M.A.; Bargiela, R.; Gaines, M.C.; Daum, B.; Ferrer, M.; Bale, N.; Koenen, M.; Sinninghe Damsté, J.S.; Yakimov, M.; Golyshin, P.N.</b> (2024). <i>Oxyplasma meridianum </i>gen. nov., sp. nov., an extremely acidophilic organotrophic member of the order <i>Thermoplasmatales</i>. <i>Int. J. Syst. Evol. Microbiol. 74(8)</i>: 006499. <a href=\"https://dx.doi.org/10.1099/ijsem.0.006499\" target=\"_blank\">https://dx.doi.org/10.1099/ijsem.0.006499</a>","AutID":390736,"MonDate":null,"AnaDate":2024,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":404456,"RR":"<b>Pradel, N.; Bartoli, M.; Koenen, M.; Bale, N.; Neumann-Schaal, M.; Spröer, C.; Bunk, B.; Rohde, M.; Pester, M.; Spring, S.</b> (2024). Description and genome analysis of a novel archaeon isolated from a syntrophic pyrite-forming enrichment culture and reclassification of <i>Methanospirillum hungatei</i> strains GP1 and SK as <i>Methanospirillum purgamenti </i>sp. nov. <i>PLoS One 19(8)</i>: e0308405. <a href=\"https://dx.doi.org/10.1371/journal.pone.0308405\" target=\"_blank\">https://dx.doi.org/10.1371/journal.pone.0308405</a>","AutID":390736,"MonDate":null,"AnaDate":2024,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":396282,"RR":"<b>Yadav, S.; Koenen, M.; Bale, N.; Reitsma, W.; Engelmann, J.C.; Stefanova, K.; Sinninghe Damsté, J.S; Villanueva, L.</b> (2024). Organic matter degradation in the deep, sulfidic waters of the Black Sea: insights into the ecophysiology of novel anaerobic bacteria. <i>Microbiome 12(1)</i>: 98. <a href=\"https://dx.doi.org/10.1186/s40168-024-01816-x\" target=\"_blank\">https://dx.doi.org/10.1186/s40168-024-01816-x</a>","AutID":390736,"MonDate":null,"AnaDate":2024,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":359959,"RR":"<b>Ding, S.; Henkel, J.V.; Hopmans, E.C.; Bale, N.J.; Koenen, M.; Villanueva, L.; Sinninghe Damsté, J.S.</b> (2022). Changes in the membrane lipid composition of a <i>Sulfurimonas</i> species depend on the electron acceptor used for sulfur oxidation. <i>ISME Commun. 2</i>: 121. <a href=\"https://dx.doi.org/10.1038/s43705-022-00207-3\" target=\"_blank\">https://dx.doi.org/10.1038/s43705-022-00207-3</a>","AutID":390736,"MonDate":null,"AnaDate":2022,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":359808,"RR":"<b>Sahonero Canavesi, D.X.; Siliakus, M.F.; Abdala Asbun, A.; Koenen, M.; von Meijenfeldt, F. A.B.; Boeren, S.; Bale, N.J.; Engelmann, J.C.; Fiege, K.; Strack van Schijndel, L.; Sinninghe Damsté, J.S.; Villanueva, L.</b> (2022). Disentangling the lipid divide: Identification of key enzymes for the biosynthesis of membrane-spanning and ether lipids in bacteria. <i>Science Advances 8(50)</i>. <a href=\"https://dx.doi.org/10.1126/sciadv.abq8652\" target=\"_blank\">https://dx.doi.org/10.1126/sciadv.abq8652</a>","AutID":390736,"MonDate":null,"AnaDate":2022,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":350956,"RR":"<b>Sahonero Canavesi, D.X.; Villanueva, L.; Bale, N.J.; Bosviel, J.; Koenen, M.; Hopmans, E.C.; Sinninghe Damsté, J.S.</b> (2022). Changes in the distribution of membrane lipids during growth of <i>Thermotoga maritima</i> at different temperatures: Indications for the potential mechanism of biosynthesis of ether-bound diabolic acid (membrane-spanning) lipids. <i>Appl. Environ. Microbiol. 88(2)</i>. <a href=\"https://dx.doi.org/10.1128/aem.01763-21\" target=\"_blank\">https://dx.doi.org/10.1128/aem.01763-21</a>","AutID":390736,"MonDate":null,"AnaDate":2022,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":353088,"RR":"<b>Sorokin, D.Y.; Elcheninov, A.G.; Khizhniak, T.V.; Koenen, M.; Bale, N.J.; Sinninghe Damsté, J.S.; Kublanov, I.V.</b> (2022). <i>Natronocalculus amylovorans gen</i>. nov., sp. nov., and <i>Natranaeroarchaeum aerophilus</i> sp. nov., dominant culturable amylolytic natronoarchaea from hypersaline soda lakes in southwestern Siberia. <i>Syst. Appl. Microbiol. 45(4)</i>: 126336. <a href=\"https://dx.doi.org/10.1016/j.syapm.2022.126336\" target=\"_blank\">https://dx.doi.org/10.1016/j.syapm.2022.126336</a>","AutID":390736,"MonDate":null,"AnaDate":2022,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":355571,"RR":"<b>Sorokin, D.Y.; Yakimov, M.; Messina, E.; Merkel, A.Y.; Koenen, M.; Bale, N.J.; Sinninghe Damsté, J.S.</b> (2022). <i>Natranaeroarchaeum sulfidigenes</i> gen. nov., sp. nov., carbohydrate-utilizing sulfur-respiring haloarchaeon from hypersaline soda lakes, a member of a new family <i>Natronoarchaeaceae</i> fam. nov. in the order <i>Halobacteriales</i>. <i>Syst. Appl. Microbiol. 45(6)</i>: 126356. <a href=\"https://dx.doi.org/10.1016/j.syapm.2022.126356\" target=\"_blank\">https://dx.doi.org/10.1016/j.syapm.2022.126356</a>","AutID":390736,"MonDate":null,"AnaDate":2022,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":339213,"RR":"<b>Lara, P.; Vega-Alvarado, L.; Sahonero Canavesi, D.X.; Koenen, M.; Villanueva, L.; Riveros-Mckay, F.; Morett, E.; Juárez, K.</b> (2021). Transcriptome Analysis Reveals Cr(VI) Adaptation Mechanisms in <i>Klebsiella</i> sp. Strain AqSCr. <i>Front. Microbiol. 12</i>. <a href=\"https://dx.doi.org/10.3389/fmicb.2021.656589\" target=\"_blank\">https://dx.doi.org/10.3389/fmicb.2021.656589</a>","AutID":390736,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":345457,"RR":"<b>Sorokin, D.Y.; Yakimov, M.M.; Messina, E.; Merkel, A.Y.; Koenen, M.; Bale, N.J.; Sinninghe Damsté, J.S</b> (2021). <i>Halapricum desulfuricans</i> sp. nov., carbohydrate-utilizing, sulfur-respiring haloarchaea from hypersaline lakes. <i>Syst. Appl. Microbiol. 44(6)</i>: 126249. <a href=\"https://dx.doi.org/10.1016/j.syapm.2021.126249\" target=\"_blank\">https://dx.doi.org/10.1016/j.syapm.2021.126249</a>","AutID":390736,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":331030,"RR":"<b>Sorokin, D.Y.; Diender, M.; Merkel, A.Y.; Koenen, M.; Bale, N.J.; Pabst, M.; Sinninghe Damsté, J.S.; Sousa, D.Z.</b> (2021). <i>Natranaerofaba carboxydovora</i> gen. nov., sp. nov., an extremely haloalkaliphilic           CO‐utilizing acetogen from a hypersaline soda lake representing a novel deep phylogenetic lineage in the class ‘Natranaerobiia’. <i>Environ. Microbiol. 23(7)</i>: 3460-3476. <a href=\"https://doi.org/10.1111/1462-2920.15241\" target=\"_blank\">https://doi.org/10.1111/1462-2920.15241</a>","AutID":390736,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":347038,"RR":"<b>Yadav, S.; Koenen, M.; Bale, N.; Sinninghe Damsté, J.S.; Villanueva, L.</b> (2021). The physiology and metabolic properties of a novel, low‐abundance <i>Psychrilyobacter</i>          species isolated from the anoxic Black Sea shed light on its ecological role. <i>Environmental Microbiology Reports 13(6)</i>: 899-910. <a href=\"https://dx.doi.org/10.1111/1758-2229.13012\" target=\"_blank\">https://dx.doi.org/10.1111/1758-2229.13012</a>","AutID":390736,"MonDate":null,"AnaDate":2021,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":332651,"RR":"<b>Bale, N.J.; Koenen, M.; Yadav, S.; Hopmans, E.C.; Villanueva, L.; Sinninghe Damsté, J.S.; Schouten, S.</b> (2020). Diagnostic amide products of amino lipids detected in the microaerophilic bacteria <i>Lutibacter</i> during routine fatty acid analysis using gas chromatography. <i>Org. Geochem. 144</i>: 104027. <a href=\"https://doi.org/10.1016/j.orggeochem.2020.104027\" target=\"_blank\">https://doi.org/10.1016/j.orggeochem.2020.104027</a>","AutID":390736,"MonDate":null,"AnaDate":2020,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":328438,"RR":"<b>van Vliet, D.M.; Lin; Bale, N.J.; Koenen, M.; Villanueva, L.; Stams, A.J.M.; Sánchez-Andrea, I.</b> (2020). <i>Pontiella desulfatans</i> gen. nov., sp. nov., and <i>Pontiella sulfatireligans</i> sp. nov., two marine anaerobes of the <i>Pontiellaceae</i> fam. nov. producing sulfated glycosaminoglycan-like exopolymers. <i>Microorganisms 8(6)</i>: 920. <a href=\"https://dx.doi.org/10.3390/microorganisms8060920\" target=\"_blank\">https://dx.doi.org/10.3390/microorganisms8060920</a>","AutID":390736,"MonDate":null,"AnaDate":2020,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":330800,"RR":"<b>Yadav, S.; Villanueva, L.; Bale, N.; Koenen, M.; Hopmans, E.C.; Sinninghe Damsté, J.S</b> (2020). Physiological, chemotaxonomic and genomic characterization of two novel piezotolerant bacteria of the family <i>Marinifilaceae</i> isolated from sulfidic waters of the Black Sea. <i>Syst. Appl. Microbiol. 43(5)</i>: 126122. <a href=\"https://doi.org/10.1016/j.syapm.2020.126122\" target=\"_blank\">https://doi.org/10.1016/j.syapm.2020.126122</a>","AutID":390736,"MonDate":null,"AnaDate":2020,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":318139,"RR":"<b>Bale, N.J.; Sorokin, D.Y.; Hopmans, E.C.; Koenen, M.; Rijpstra, W.I.C.; Villanueva, L.; Wienk, H.; Sinninghe Damsté, J.S.</b> (2019). New insights into the polar lipid composition of extremely halo(alkali)philic euryarchaea from hypersaline lakes. <i>Front. Microbiol. 10</i>: article 377. <a href=\"https://dx.doi.org/10.3389/fmicb.2019.00377\" target=\"_blank\">https://dx.doi.org/10.3389/fmicb.2019.00377</a>","AutID":390736,"MonDate":null,"AnaDate":2019,"PeerRev":1,"outputType":"1_A1","OpenAcc":1},{"BRefID":314293,"RR":"<b>Besseling, M.A.; Hopmans, E.C.; Koenen, M.; van der Meer, M.T.J.; Vreugdenhil, S.; Schouten, S.; Sinninghe Damsté, J.S; Villanueva, L.</b> (2019). Depth-related differences in archaeal populations impact the isoprenoid tetraether lipid composition of the Mediterranean Sea water column. <i>Org. Geochem. 135</i>: 16-31. <a href=\"https://dx.doi.org/10.1016/j.orggeochem.2019.06.008\" target=\"_blank\">https://dx.doi.org/10.1016/j.orggeochem.2019.06.008</a>","AutID":390736,"MonDate":null,"AnaDate":2019,"PeerRev":1,"outputType":"1_A1","OpenAcc":1}]},"urls":[{"URL":"www.nioz.nl/en/about/organisation/staff/michel-koenen","externalID":null,"URLTypeCode":null,"URLType":"Personal home page"}],"spcols":null,"thesterms":null,"taxterms":null,"pub":1,"newses":{"SesID":95484,"LoginName":"VLIZ2000\\ruthv","LoginID":79,"DD":"2019-09-02"},"updses":{"SesID":95484,"LoginName":"VLIZ2000\\ruthv","LoginID":79,"DD":"2019-09-02"},"urlmaps":[],"resmessage":"no id specified","complete":1}