{"refrec":{"BRefID":125798,"RR":"<b>Sahan, E.; Muyzer, G.</b> (2008). Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary. <i>FEMS Microbiol. Ecol. 64(2)</i>: 175-186. <a href=\"http://dx.doi.org/10.1111/j.1574-6941.2008.00462.x\" target=\"_blank\">http://dx.doi.org/10.1111/j.1574-6941.2008.00462.x</a>","BEntID":119964,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>FEMS Microbiol. Ecol. 64(2)</i>: 175-186. <a href=\"http://dx.doi.org/10.1111/j.1574-6941.2008.00462.x\" target=\"_blank\">http://dx.doi.org/10.1111/j.1574-6941.2008.00462.x</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":1,"TerrestrialFlag":0,"Authorstring":"Sahan, E.; Muyzer, G.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Sahan, E.; Muyzer, G.","Englishabstract":"The diversity and spatio-temporal distribution of ammonia-oxidizing Archaea (AOA) and Bacteria (AOB) were investigated along a salinity gradient in sediments of the Westerschelde estuary. Sediment samples were collected from three sites with different salinities, and at six time points over the year. Denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA and amoA gene fragments was used to identify the AOA and AOB present. Members of the AOA were mainly belonging to the Crenarchaeota Group 1, which were found at all sites, while members of the genus <i>Nitrosomonas</i>, which were abundant at the brackish sites, and of the genus <i>Nitrosospira</i>, which were present in early spring at the marine sites, were found to be the dominant AOB. Statistical analysis indicated that salinity and temperature were the main factors controlling the diversity and distribution of both AOA and AOB. Variability in net primary production rates was also correlated with species composition of both groups, but changes in the nitrite concentration only to the distribution of the AOA.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-04-18 01:31:26.969890","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"amoA; Crenarchaeota; Nitrosomonas; Nitrosospira; population dynamics","OtherDescriptors":null,"Notes":null,"AnaPub":2008,"MonPub":null,"DateUpdate":"2018-05-17","DateCreate":"2008-08-26","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000254948400003","VABBcode":null,"OpenAcc":1,"DOI":"10.1111/j.1574-6941.2008.00462.x"},"refs":null,"anarec":{"AnaID":125798,"PubliDate":2008,"Pagination":"175-186","XtraPublOfAnaID":null,"ISBN":null,"Volume":"64","Issue":"2","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":42870,"SerRR":"FEMS Microbiology Ecology. Federation of European Microbiological Societies: Amsterdam.  ISSN 0168-6496; e-ISSN 1574-6941","StandardTitleSer":"FEMS Microbiology Ecology","ISSN":"0168-6496","AbbrevSer":"FEMS Microbiol. Ecol.","StandardTitleMon":null,"StartPage":175,"Pages":12,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Sahan","Firstname":"Emel","Initials":"E.","Affiliation":"Department of Biotechnology, Delft University of Technology","Discriminator":null,"CorporateFlag":0,"BEntID":119964,"AutID":174573,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":"Delft University of Technology; Kluyver Laboratory for Biotechnology","ORCID":null,"PersID":23977,"InsID":4981},{"AutName":"Muyzer","Firstname":"Gerard","Initials":"G.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":119964,"AutID":33197,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":"0000-0002-2422-0732","PersID":3491,"InsID":null}],"mapdetails":null,"datasets":[{"DasID":1213,"Acronym":"DIVMOM","Citation":"Creach, V., Kromkamp J., Stal L. 2003: Relationship between diversity and productivity of benthic diatoms along the salinity gradient in the Westerschelde, The Netherlands. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1213","StandardTitle":"Relationship between diversity and productivity of benthic diatoms along the salinity gradient in the Westerschelde, The Netherlands","RelationID":2,"DOI":null}],"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":138646,"LibID":36,"BRefID":125798,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"138646","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Federation of European Microbiological Societies","City":"Amsterdam"}],"MONpubls":null,"pictures":[],"thestermsPath":[{"ThesaurusTerm":"ANE, Netherlands, Westerschelde","ThestID":182103,"Acronym":"ASFA_GEOT","ThesTermPath":"ANE, Netherlands, Westerschelde"},{"ThesaurusTerm":"Population dynamics","ThestID":9702,"Acronym":"ASFA","ThesTermPath":"Population dynamics"}],"thestermsASFA":[{"ThesaurusTerm":"ANE, Netherlands, Westerschelde"},{"ThesaurusTerm":"Population dynamics"}],"taxtermsASFA":[{"TaxTerm":"Nitrosomonas"}],"geotermsASFA":[{"GeoTerm":"Appelzak"},{"GeoTerm":"Biezelingse Ham Mud Flat"},{"GeoTerm":"PaulinaSchor"},{"GeoTerm":"Westerschelde"}],"collections":[{"Collection":"NIOO-CEME collection","ShortName":"nioo-ceme collection"},{"Collection":"ScheldeMonitor","ShortName":"scheldemonitor"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"867":{"SpName":"IMIS themes","SpColID":867,"ParSpColID":null,"TopParID":null,"ShortName":"IMIS themes","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"IMIS themes"},"638":{"SpName":"Morphodynamics","SpColID":638,"ParSpColID":867,"TopParID":867,"ShortName":"Morfodynamiek","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":867,"SpColPath":"IMIS themes/Morfodynamiek"},"650":{"SpName":"Morphodynamics: Bottom and suspended matter","SpColID":650,"ParSpColID":638,"TopParID":867,"ShortName":"Morfodynamiek: Bodem en zwevend stof","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":867,"SpColPath":"IMIS themes/Morfodynamiek/Morfodynamiek: Bodem en zwevend stof"},"345":{"SpName":"NIOO-CEME collection","SpColID":345,"ParSpColID":null,"TopParID":null,"ShortName":"nioo-ceme collection","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"nioo-ceme collection"},"27":{"SpName":"ScheldeMonitor","SpColID":27,"ParSpColID":null,"TopParID":null,"ShortName":"scheldemonitor","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"scheldemonitor"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":119964,"AbstractFlag":-1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":119964,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"http://dx.doi.org/10.1111/j.1574-6941.2008.00462.x","externalID":"10.1111/j.1574-6941.2008.00462.x","URLTypeCode":"DOI","URLID":25206,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":[{"ThesaurusTerm":"ANE, Netherlands, Westerschelde","ThestID":182103,"Acronym":"ASFA_GEOT","ThesTypID":34,"ThesType":"ASFA Geoterms"},{"ThesaurusTerm":"Population dynamics","ThestID":9702,"Acronym":"ASFA","ThesTypID":1,"ThesType":"ASFA Thesaurus List"}],"taxterms":[{"TaxTerm":"Nitrosomonas","AphiaID":569927,"TaxtID":35714}],"geoterms":[{"GeoTerm":"Appelzak","GeoObjectID":4800,"GeotID":6317},{"GeoTerm":"Biezelingse Ham Mud Flat","GeoObjectID":9111,"GeotID":6158},{"GeoTerm":"PaulinaSchor","GeoObjectID":14272,"GeotID":6655},{"GeoTerm":"Westerschelde","GeoObjectID":4752,"GeotID":385}],"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":[{"ThesaurusTerm":"ANE, Netherlands, Westerschelde","DutchTerm":null,"ThestID":182103,"Acronym":"ASFA_GEOT","ThesTypID":34,"ThesType":"ASFA Geoterms"},{"ThesaurusTerm":"Population dynamics","DutchTerm":"Populatiedynamiek","ThestID":9702,"Acronym":"ASFA","ThesTypID":1,"ThesType":"ASFA Thesaurus List"}],"taxtermsFRIS":[{"TaxTerm":"Nitrosomonas","DutchTerm":null,"AphiaID":569927,"TaxtID":35714}],"geotermsFRIS":[{"GeoTerm":"Appelzak","DutchTerm":null},{"GeoTerm":"Biezelingse Ham Mud Flat","DutchTerm":"Biezelingse Ham Mud Flat"},{"GeoTerm":"PaulinaSchor","DutchTerm":"PaulinaSchor"},{"GeoTerm":"Westerschelde","DutchTerm":"Westerschelde"}],"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Haspeslagh, Jan, J.","newSesDate":{"date":"2008-08-26 11:39:57.270000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2018-05-17 20:54:11.920000","timezone_type":3,"timezone":"Europe/Brussels"}}}