{"refrec":{"BRefID":143187,"RR":"<b>Van den Meersche, K.; Soetaert, K.; Middelburg, J.J.</b> (2009). A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers, <b><i>in</i></b>: Van den Meersche, K. <i>Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling.</i> pp. 51-66","BEntID":307006,"PublicFlag":1,"CheckedFlag":0,"wosflag":0,"vabbflag":0,"RefStringPartII":", <b><i>in</i></b>: Van den Meersche, K. <i>Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling.</i> pp. 51-66","DocTypID":17,"DocType":"Book chapters","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Van den Meersche, K.; Soetaert, K.; Middelburg, J.J.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Van den Meersche, K. <i>et al.</i>","Englishabstract":"Determination of microbial taxonomy based on lipid or pigment spectra requires use of a compositional estimator. We present a new approach based on Bayesian inference and an implementation in the open software platform R. The Bayesian Compositional Estimator (BCE) aims not only to obtain a maximum likelihood solution, but also to provide a complete estimate of the taxonomic composition, including probability distributions and dependencies between estimated values. BCE results are compared with those obtained with CHEMTAX. The BCE has not only a similar accuracy, but also extracts more information from the data, the most obvious being standard deviation and covariance estimates.","AbstractOtherLang":null,"BibLvlCode":"AM","StandardTitle":"A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:01.897972","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2009,"MonPub":null,"DateUpdate":"2019-08-28","DateCreate":"2010-01-18","SecASFANote":null,"ConfID":null,"PeerRev":0,"VlizCoreFlag":1,"WoScode":null,"VABBcode":null,"OpenAcc":0},"refs":null,"anarec":{"AnaID":143187,"PubliDate":2009,"Pagination":"51-66","XtraPublOfAnaID":null,"ISBN":null,"Volume":null,"Issue":null,"BRefMon":143185,"BRefMonRR":"<b>Van den Meersche, K.</b> (2009). Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. PhD Thesis. Universiteit Gent, Vakgroep Biologie, Sectie Mariene Biologie: Gent.  199 pp.","BRefXtra":null,"BRefXtraRR":null,"SerBRefID":null,"SerRR":null,"StandardTitleSer":null,"ISSN":null,"AbbrevSer":null,"StandardTitleMon":"Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling","StartPage":51,"Pages":16,"ToPubliDate":null,"BRefBibLvlCode":"M","SerNotes":null,"AutString":"Van den Meersche, K."},"monrec":null,"serrec":null,"relations":null,"relationsRev":[{"XBRefID":122843,"RefStrFull":"<b>Van den Meersche, K.; Soetaert, K.; Middelburg, J.J.</b> (2008). A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers. <i>Limnol. Oceanogr., Methods 6(5)</i>: 190-199. <a href=\"https://dx.doi.org/10.4319/lom.2008.6.190\" target=\"_blank\">https://dx.doi.org/10.4319/lom.2008.6.190</a>","RelID":4,"RelationY":"Related to","StandardTitle":"A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers"}],"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Van den Meersche","Firstname":"Karel","Initials":"K.","Affiliation":"Univ Ghent, Dept Biol, Marine Biol Sect, B-9000 Ghent, Belgium. ;   Netherlands Inst Ecol, NIOO KNAW, NL-4400 AC Yerseke, Netherlands.","Discriminator":null,"CorporateFlag":0,"BEntID":307006,"AutID":143240,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"MARBIOL","InsFSN":"Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biologie; Onderzoeksgroep Mariene Biologie","ORCID":null,"PersID":7570,"InsID":13},{"AutName":"Soetaert","Firstname":"Karline","Initials":"K.","Affiliation":"Netherlands Inst Ecol, NIOO KNAW, NL-4400 AC Yerseke, Netherlands.","Discriminator":"K.","CorporateFlag":0,"BEntID":307006,"AutID":143241,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":"0000-0003-4603-7100","PersID":265,"InsID":null},{"AutName":"Middelburg","Firstname":null,"Initials":"J.J.","Affiliation":"Netherlands Inst Ecol, NIOO KNAW, NL-4400 AC Yerseke, Netherlands.","Discriminator":null,"CorporateFlag":0,"BEntID":307006,"AutID":143242,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":"0000-0003-3601-9072","PersID":3477,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":155736,"LibID":36,"BRefID":143187,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":0,"hasOCRd":null,"ShelfLocCode":null,"RFID":null,"PaidValue":null,"Medium":"Paper","Description":null,"Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":null,"URL":null,"ClassifID":null,"Classification":null,"ReqLink":null,"ClassifTypID":null,"URLLocation":null,"SubDir":null,"InternalReq":null,"LoggedInReq":null,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":null,"FileDescr":null,"InsPub":1,"InsID":36,"FileFormID":null,"LendableFlag":0,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":null,"MONpubls":[{"PublName":"Universiteit Gent, Vakgroep Biologie, Sectie Mariene Biologie","Place":"Gent"}],"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"222":{"SpName":"BMB - Belgische Mariene Bibliografie","SpColID":222,"ParSpColID":null,"TopParID":null,"ShortName":"BMB","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"BMB"},"422":{"SpName":"Section Marine Biology","SpColID":422,"ParSpColID":null,"TopParID":null,"ShortName":"MarBiol","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"MarBiol"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":[{"AutName":"Van den Meersche","Initials":"K.","CorporateFlag":0,"BEntID":136374,"AutID":41744,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"AutStrTrunc":"Van den Meersche, K."}],"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":307006,"AbstractFlag":-1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":307006,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":null,"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Chisala, Chilekwa, C.","newSesDate":{"date":"2010-01-18 15:26:24.560000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Bouchti, Zohra, Z.","updSesDate":{"date":"2019-08-28 08:11:57.943000","timezone_type":3,"timezone":"Europe/Brussels"}}}