{"refrec":{"BRefID":222823,"RR":"<b>Erguder, T.H.; Boon, N.; Wittebolle, L.; Marzorati, M.; Verstraete, W.</b> (2009). Environmental factors shaping the ecological niches of ammonia-oxidizing archaea. <i>FEMS Microbiol. Rev. 33(5)</i>: 855-869. <a href=\"http://dx.doi.org/10.1111/j.1574-6976.2009.00179.x\" target=\"_blank\">http://dx.doi.org/10.1111/j.1574-6976.2009.00179.x</a>","BEntID":214549,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>FEMS Microbiol. Rev. 33(5)</i>: 855-869. <a href=\"http://dx.doi.org/10.1111/j.1574-6976.2009.00179.x\" target=\"_blank\">http://dx.doi.org/10.1111/j.1574-6976.2009.00179.x</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Erguder, T.H.; Boon, N.; Wittebolle, L.; Marzorati, M.; Verstraete, W.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Erguder, T.H. <i>et al.</i>","Englishabstract":"For more than 100 years it was believed that bacteria were the only group responsible for the oxidation of ammonia. However, recently, a new strain of archaea bearing a putative ammonia monooxygenase subunit A (<em>amoA</em>) gene and able to oxidize ammonia was isolated from a marine aquarium tank. Ammonia-oxidizing archaea (AOA) were subsequently discovered in many ecosystems of varied characteristics and even found as the predominant causal organisms in some environments. Here, we summarize the current knowledge on the environmental conditions related to the presence of AOA and discuss the possible site-related properties. Considering these data, we deduct the possible niches of AOA based on pH, sulfide and phosphate levels. It is proposed that the AOA might be important actors within the nitrogen cycle in low-nutrient, low-pH, and sulfide-containing environments.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Environmental factors shaping the ecological niches of ammonia-oxidizing archaea","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-06-10 01:31:46.146359","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"    ammonia-oxidizing bacteria;     ammonium;     anammox;     crenarchaeota;     dissolved oxygen;     phosphorous","OtherDescriptors":null,"Notes":null,"AnaPub":2009,"MonPub":null,"DateUpdate":"2014-10-09","DateCreate":"2013-02-12","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000268588800002","VABBcode":null,"OpenAcc":1,"DOI":"10.1111/j.1574-6976.2009.00179.x"},"refs":null,"anarec":{"AnaID":222823,"PubliDate":2009,"Pagination":"855-869","XtraPublOfAnaID":null,"ISBN":null,"Volume":"33","Issue":"5","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":42869,"SerRR":"FEMS. Microbiology reviews. Wiley-Blackwell: Amsterdam.  ISSN 0168-6445; e-ISSN 1574-6976","StandardTitleSer":"FEMS. Microbiology reviews","ISSN":"0168-6445","AbbrevSer":"FEMS Microbiol. Rev.","StandardTitleMon":null,"StartPage":855,"Pages":15,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Erguder","Firstname":"Tuba","Initials":"T.H.","Affiliation":"Laboratory of Microbial Ecology and Technology (LabMET), Gent University","Discriminator":null,"CorporateFlag":0,"BEntID":214549,"AutID":158161,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"CMET","InsFSN":"Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology","ORCID":null,"PersID":27727,"InsID":6702},{"AutName":"Boon","Firstname":"Nico","Initials":"N.","Affiliation":"Laboratory of Microbial Ecology and Technology (LabMET), Gent University","Discriminator":null,"CorporateFlag":0,"BEntID":214549,"AutID":158162,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"CMET","InsFSN":"Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology","ORCID":"0000-0002-7734-3103","PersID":15308,"InsID":6702},{"AutName":"Wittebolle","Firstname":"Lieven","Initials":"L.","Affiliation":"Laboratory of Microbial Ecology and Technology (LabMET), Gent University","Discriminator":null,"CorporateFlag":0,"BEntID":214549,"AutID":158163,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"CMET","InsFSN":"Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology","ORCID":null,"PersID":27638,"InsID":6702},{"AutName":"Marzorati","Firstname":"Massimo","Initials":"M.","Affiliation":"Laboratory of Microbial Ecology and Technology (LabMET), Gent University","Discriminator":null,"CorporateFlag":0,"BEntID":214549,"AutID":158164,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"CMET","InsFSN":"Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology","ORCID":null,"PersID":27652,"InsID":6702},{"AutName":"Verstraete","Firstname":"Willy","Initials":"W.","Affiliation":"Laboratory of Microbial Ecology and Technology (LabMET), Gent University","Discriminator":null,"CorporateFlag":0,"BEntID":214549,"AutID":158165,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"CMET","InsFSN":"Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology","ORCID":null,"PersID":616,"InsID":6702}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":243003,"LibID":36,"BRefID":222823,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"243003","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Wiley-Blackwell","City":"Amsterdam"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":[{"TaxTerm":"Crenarchaeota"}],"geotermsASFA":null,"collections":[{"Collection":"OMA - Open Marien Archief","ShortName":"OMA"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"222":{"SpName":"BMB - Belgische Mariene Bibliografie","SpColID":222,"ParSpColID":null,"TopParID":null,"ShortName":"BMB","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"BMB"},"221":{"SpName":"OMA - Open Marien Archief","SpColID":221,"ParSpColID":null,"TopParID":null,"ShortName":"OMA","URLLocation":null,"LibID":36,"OpenRepoFlag":1,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"OMA"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":214549,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"http://dx.doi.org/10.1111/j.1574-6976.2009.00179.x","externalID":"10.1111/j.1574-6976.2009.00179.x","URLTypeCode":"DOI","URLID":25531,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":[{"TaxTerm":"Crenarchaeota","AphiaID":559440,"TaxtID":39265}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":[{"TaxTerm":"Crenarchaeota","DutchTerm":null,"AphiaID":559440,"TaxtID":39265}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Bouchti, Zohra, Z.","newSesDate":{"date":"2013-02-12 11:21:50.533000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2014-10-09 20:45:17.310000","timezone_type":3,"timezone":"Europe/Brussels"}}}
