{"refrec":{"BRefID":230878,"RR":"<b>Kim, J.J.; Alkawally, M.; Brady, A.L.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Dunfield, P.F.</b> (2013). <i>Chryseolinea serpens</i> gen. nov., sp. nov., a member of the phylum <i>Bacteroidetes</i> isolated from soil. <i>Int. J. Syst. Evol. Microbiol. 63</i>: 654-660. <a href=\"http://dx.doi.org/10.1099/ijs.0.039404-0\" target=\"_blank\">dx.doi.org/10.1099/ijs.0.039404-0</a>","BEntID":222590,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Int. J. Syst. Evol. Microbiol. 63</i>: 654-660. <a href=\"https://dx.doi.org/10.1099/ijs.0.039404-0\" target=\"_blank\">https://dx.doi.org/10.1099/ijs.0.039404-0</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Kim, J.J.; Alkawally, M.; Brady, A.L.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Dunfield, P.F.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Kim, J.J. <i>et al.</i>","Englishabstract":"An aerobic chemoheterotrophic gliding bacterium, designated RYG(T), was isolated from a soil in Germany. Cells were Gram-stain-negative, thin rods (0.4-0.6 mu m in width and 2.0-5.5 gm in length). Cells multiplied by normal cell division and no resting stages were observed. Colonies were yellow and displayed swarming edges. Gliding motility was observed in wet mounts. Strain RYGT grew at pH 5.6-7.7 (optimum pH 6.6-7.0), at 13-37 degrees C (optimum 25-30 degrees C) and with 0-1.0% NaCl (optimum 0-0.1 %). The isolate was incapable of atmospheric nitrogen fixation and grew on most mono- and disaccharides as well as a few polysaccharides and organic acids. The predominant menaquinone was MK-7, the major cellular fatty acids were C-16:1 omega 5c and iso-C-15:0 and the major intact polar lipids were composed of phosphatidylethanolamine derivatives and two unknown series. The DNA G+C content was 49.9 mol%. Based on 16S rRNA gene sequence analysis, the isolate belonged to the phylum Bacteroidetes, class Cytophagia, order Cytophagales, but was only distantly related to any cultured bacteria. The closest relatives were Ohtaekwangia koreensis 3B-2(T) and Ohtaekwangia kribbensis 10AO(T) (both 93% 16S rRNA gene sequence similarity). We propose a novel genus and species, Chryseolinea serpens gen. nov., sp. nov.. Strain RYG(T) (=DSM 24574(T)=ATCC BAA-2075(T)) is the type strain.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"<i>Chryseolinea serpens</i> gen. nov., sp. nov., a member of the phylum <i>Bacteroidetes</i> isolated from soil","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:32:52.928458","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2013,"MonPub":null,"DateUpdate":"2014-08-08","DateCreate":"2013-12-01","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000317170400041","VABBcode":null,"OpenAcc":0,"DOI":"10.1099/ijs.0.039404-0"},"refs":null,"anarec":{"AnaID":230878,"PubliDate":2013,"Pagination":"654-660","XtraPublOfAnaID":null,"ISBN":null,"Volume":"63","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":56795,"SerRR":"International Journal of Systematic and Evolutionary Microbiology. Society for General Microbiology: Reading.  ISSN 1466-5026; e-ISSN 1466-5034","StandardTitleSer":"International Journal of Systematic and Evolutionary Microbiology","ISSN":"1466-5026","AbbrevSer":"Int. J. Syst. Evol. Microbiol.","StandardTitleMon":null,"StartPage":654,"Pages":7,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Kim","Firstname":"Joong-Jae","Initials":"J.J.","Affiliation":"Department of Biological Sciences, University of Calgary","Discriminator":null,"CorporateFlag":0,"BEntID":222590,"AutID":170435,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Alkawally","Firstname":"Mariam","Initials":"M.","Affiliation":"Department of Biological Sciences, University of Calgary","Discriminator":null,"CorporateFlag":0,"BEntID":222590,"AutID":170436,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Brady","Firstname":"Allyson","Initials":"A.L.","Affiliation":"Department of Biological Sciences, University of Calgary","Discriminator":null,"CorporateFlag":0,"BEntID":222590,"AutID":170437,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Rijpstra","Firstname":"W. Irene","Initials":"W.I.C.","Affiliation":"Department of Marine Organic Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research","Discriminator":null,"CorporateFlag":0,"BEntID":222590,"AutID":181910,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"BGC","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; NIOZ Texel; Afdeling Mariene Organische Biogeochemie","ORCID":null,"PersID":29917,"InsID":13083},{"AutName":"Sinninghe Damsté","Firstname":"Jaap","Initials":"J.S.","Affiliation":"Department of Marine Organic Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research","Discriminator":null,"CorporateFlag":0,"BEntID":222590,"AutID":185812,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"BGC","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; NIOZ Texel; Afdeling Mariene Organische Biogeochemie","ORCID":"0000-0002-8683-1854","PersID":29942,"InsID":13083},{"AutName":"Dunfield","Firstname":"Peter","Initials":"P.F.","Affiliation":"Department of Biological Sciences, University of Calgary","Discriminator":null,"CorporateFlag":0,"BEntID":222590,"AutID":170440,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":222590,"BEntPrivate":null,"availability":[{"BInstID":260997,"LibID":2779,"BRefID":230878,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"260997","RFID":null,"PaidValue":null,"Medium":"Server","Description":null,"Acronym":null,"Library":"NIOZ","DutchTerm":null,"URL":null,"ClassifID":261,"Classification":"NIOZ files","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":null,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":397,"FileFormID":6,"LendableFlag":null,"PublicFlag":1,"orderLib":"NIOZ","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":805,"SERpubls":[{"PublName":"Society for General Microbiology","City":"Reading"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"805":{"SpName":"Koninklijk Nederlands Instituut voor Onderzoek der Zee","SpColID":805,"ParSpColID":null,"TopParID":null,"ShortName":"NIOZ","URLLocation":"https://www.vliz.be/imis/nioz/imis.php?refid=","LibID":2779,"OpenRepoFlag":1,"SpTypID":1,"TopParIDNotWebsite":null,"SpColPath":"NIOZ"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":222590,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1099/ijs.0.039404-0","externalID":"10.1099/ijs.0.039404-0","URLTypeCode":"DOI","URLID":30520,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Lyssens, Liesbeth, L.","newSesDate":{"date":"2013-12-01 18:55:58.187000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Leonne.van.der.Weegen@nioz.nl","updSesDate":{"date":"2014-08-08 09:24:30.560000","timezone_type":3,"timezone":"Europe/Brussels"}}}
