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The species M. acutus, M. alternatus, M. gracilis, M. intermedius and M. latus are junior synonyms of M. ziphioides. The genus is characterized by five autapomorphies: a snout lengthened in a rostrum, a narrow cranial roof, the premaxillae forming a secondary palate and hiding the vomer, the lack of an anterior process on the maxilla, and the supraoccipital without a median crest. Despite its specialized characters, Martinichthys also keeps some primitive features for the order, such as the presence of an autogenous basisphenoid and of three lingual toothed plates. 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