{"refrec":{"BRefID":250904,"RR":"<b>Lin, S.; Cheng, S.; song, B.; Zhong, X.; Lin, X.; Li, W.; Li, L.; Zhang, Y.; Zhang, H.; Ji, Z.; Cai, M.; Zhuang, Y.; Shi, X.; Lin, L.; Wang, L.; Wang, Z.; Liu, X.; Yu, S.; Zeng, P.; Hao, H.; Zou, Q.; Chen, C.; Li, Y.; Wang, Y.; Xu, C.; Meng, S.; Xu, X.; Wang, J.; Yang, H.; Campbell, D.A.; Sturm, N.R.; Dagenais-Bellefeuille, S.; Morse, D.</b> (2015). The <i>Symbiodinium kawagutii</i> genome illuminates dinoflagellate gene expression and coral symbiosis. <i>Science (Wash.) 350(6261)</i>: 691-694. <a href=\"http://dx.doi.org/10.1126/science.aad0408\" target=\"_blank\">http://dx.doi.org/10.1126/science.aad0408</a>","BEntID":242599,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Science (Wash.) 350(6261)</i>: 691-694. <a href=\"http://dx.doi.org/10.1126/science.aad0408\" target=\"_blank\">http://dx.doi.org/10.1126/science.aad0408</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Lin, S.; Cheng, S.; song, B.; Zhong, X.; Lin, X.; Li, W.; Li, L.; Zhang, Y.; Zhang, H.; Ji, Z.; Cai, M.; Zhuang, Y.; Shi, X.; Lin, L.; Wang, L.; Wang, Z.; Liu, X.; Yu, S.; Zeng, P.; Hao, H.; Zou, Q.; Chen, C.; Li, Y.; Wang, Y.; Xu, C.; Meng, S.; Xu, X.; Wang, J.; Yang, H.; Campbell, D.A.; Sturm, N.R.; Dagenais-Bellefeuille, S.; Morse, D.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Lin, S. <i>et al.</i>","Englishabstract":"Dinoflagellates are important components of marine ecosystems and essential coral symbionts, yet little is known about their genomes. We report here on the analysis of a high-quality assembly from the 1180-megabase genome of <em>Symbiodinium kawagutii</em>. We annotated protein-coding genes and identified <em>Symbiodinium</em>-specific gene families. No whole-genome duplication was observed, but instead we found active (retro)transposition and gene family expansion, especially in processes important for successful symbiosis with corals. We also documented genes potentially governing sexual reproduction and cyst formation, novel promoter elements, and a microRNA system potentially regulating gene expression in both symbiont and coral. 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