{"refrec":{"BRefID":256677,"RR":"<b>Appolinario, L.; Tschoeke, D.; Rua, C.; Venas, T.; Campeao, M.; Amaral, G.; Leomil, L.; de Oliveira, L.; Vieira, V.; Otsuki, K.; Swings, J.; Thompson, F.; Thompson, C.</b> (2016). Description of <i>Endozoicomonas arenosclerae</i> sp. nov. using a genomic taxonomy approach. <i>Antonie van Leeuwenhoek 109(3)</i>: 431-438. <a href=\"https://dx.doi.org/10.1007/s10482-016-0649-x\" target=\"_blank\">https://dx.doi.org/10.1007/s10482-016-0649-x</a>","BEntID":248686,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Antonie van Leeuwenhoek 109(3)</i>: 431-438. <a href=\"https://dx.doi.org/10.1007/s10482-016-0649-x\" target=\"_blank\">https://dx.doi.org/10.1007/s10482-016-0649-x</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Appolinario, L.; Tschoeke, D.; Rua, C.; Venas, T.; Campeao, M.; Amaral, G.; Leomil, L.; de Oliveira, L.; Vieira, V.; Otsuki, K.; Swings, J.; Thompson, F.; Thompson, C.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Appolinario, L. <i>et al.</i>","Englishabstract":"The taxonomic position of strains Ab112<sup>T</sup> (CBAS 572<sup>T</sup>) and Ab227_MC (CBAS 573) was evaluated by means of genomic taxonomy. These isolates represent the dominant flora cultured from the healthy marine sponge <i>Arenosclera brasiliensis</i>, endemic to Rio de Janeiro. Strains CBAS 572<sup>T</sup> and CBAS 573 shared >98 % 16S rRNA sequence identity with <i>Endozoicomonas numazuensis</i> and <i>Endozoicomonas montiporae</i>. In silico DNA–DNA Hybridization, i.e. genome-to-genome distance (GGD), amino acid identity (AAI) and average nucleotide identity (ANI) further showed that these strains had <70 %, at maximum 71.1 and 78 % of identity, respectively, to their closest neighbours <i>E. numazuensis</i> and <i>E. montiporae</i>. The DNA G+C content of CBAS 572<sup>T</sup> and CBAS 573 were 47.6 and 47.7 mol%, respectively. Phenotypic and chemotaxonomic features also allowed a separation from the type strains of their phylogenetic neighbours. Useful phenotypic features for discriminating CBAS 572<sup>T</sup> and CBAS 573 from <i>E. numazuensis</i> and <i>E. montiporae</i> species include C8 esterase, N-acetyl-ß-glucosaminidase, citric acid, uridine and siderophore. The species <i>Endozoicomonas</i> <i>arenosclerae</i> sp. nov. is proposed to harbour the new isolates. The type strain is CBAS 572<sup>T</sup> (=Ab112<sup>T</sup>).","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Description of <i>Endozoicomonas arenosclerae</i> sp. nov. using a genomic taxonomy approach","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Endozoicomonas new species; Genomes; Comparative genomics; Genomictaxonomy","OtherDescriptors":null,"Notes":null,"AnaPub":2016,"MonPub":null,"DateUpdate":"2018-08-28","DateCreate":"2016-05-29","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000371237200010","VABBcode":null,"OpenAcc":0,"DOI":"10.1007/s10482-016-0649-x"},"refs":null,"anarec":{"AnaID":256677,"PubliDate":2016,"Pagination":"431-438","XtraPublOfAnaID":null,"ISBN":null,"Volume":"109","Issue":"3","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":42357,"SerRR":"Antonie van Leeuwenhoek. Stichting Antonie van Leeuwenhoek: Amsterdam.  ISSN 0003-6072; e-ISSN 1572-9699","StandardTitleSer":"Antonie van Leeuwenhoek","ISSN":"0003-6072","AbbrevSer":"Antonie van Leeuwenhoek","StandardTitleMon":null,"StartPage":431,"Pages":8,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Appolinario","Firstname":null,"Initials":"L.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219012,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Tschoeke","Firstname":null,"Initials":"D.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219013,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Rua","Firstname":null,"Initials":"C.","Affiliation":"Univ Sao Paulo, Inst Quim Sao Carlos, Sao Carlos, SP, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219014,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Venas","Firstname":null,"Initials":"T.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219015,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Campeao","Firstname":null,"Initials":"M.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219016,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Amaral","Firstname":null,"Initials":"G.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219017,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Leomil","Firstname":null,"Initials":"L.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219018,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"de Oliveira","Firstname":null,"Initials":"L.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219019,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Vieira","Firstname":null,"Initials":"V.","Affiliation":"Fiocruz MS, IOC, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219020,"OrderNr":9,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Otsuki","Firstname":null,"Initials":"K.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219021,"OrderNr":10,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Swings","Firstname":"Jean","Initials":"J.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219022,"OrderNr":11,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":"0000-0003-3693-8087","PersID":145,"InsID":null},{"AutName":"Thompson","Firstname":null,"Initials":"F.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219024,"OrderNr":12,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Thompson","Firstname":null,"Initials":"C.","Affiliation":"Univ Fed Rio de Janeiro, Inst Biol, Rio De Janeiro, RJ, Brazil.","Discriminator":null,"CorporateFlag":0,"BEntID":248686,"AutID":219026,"OrderNr":13,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":318371,"LibID":36,"BRefID":256677,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":null,"ShelfLocCode":"318371","RFID":null,"PaidValue":null,"Medium":"Server","Description":"Interne VLIZ documenten","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Non-open access","URL":null,"ClassifID":228,"Classification":"Non-open access","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":1,"Disclaimer":"Disclaimer_VLIZ_Intern","DutchDisclaimer":"<p>Deze publicatie is enkel beschikbaar voor persoonlijk gebruik binnen de Innovocean site <br />en mag op geen enkele manier verder worden verspreid.</p>","FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Stichting Antonie van Leeuwenhoek","City":"Amsterdam"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":[{"TaxTerm":"Endozoicomonas"}],"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"222":{"SpName":"BMB - Belgische Mariene Bibliografie","SpColID":222,"ParSpColID":null,"TopParID":null,"ShortName":"BMB","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"BMB"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":248686,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":248686,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1007/s10482-016-0649-x","externalID":"10.1007/s10482-016-0649-x","URLTypeCode":"DOI","URLID":67397,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":[{"TaxTerm":"Endozoicomonas","AphiaID":570425,"TaxtID":42605}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":[{"TaxTerm":"Endozoicomonas","DutchTerm":null,"AphiaID":570425,"TaxtID":42605}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Lyssens, Liesbeth, L.","newSesDate":{"date":"2016-05-29 22:47:13.420000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"VLIZ2000\\liaa","updSesDate":{"date":"2018-08-28 08:08:37.727000","timezone_type":3,"timezone":"Europe/Brussels"}}}