{"refrec":{"BRefID":280837,"RR":"<b>Ast, J.C.; Cleenwerck, I.; Engelbeen, K.; Urbanczyk, H.; Thompson, F.L.; De Vos, P.</b> (2007). <i>Photobacterium kishitanii</i> sp nov., a luminous marine bacterium symbiotic with deep-sea fishes. <i>Int. J. Syst. Evol. Microbiol. 57</i>: 2073-2078. <a href=\"http://dx.doi.org/10.1099/ijs.0.65153-0\" target=\"_blank\">dx.doi.org/10.1099/ijs.0.65153-0</a>","BEntID":272856,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Int. J. Syst. Evol. Microbiol. 57</i>: 2073-2078. <a href=\"https://dx.doi.org/10.1099/ijs.0.65153-0\" target=\"_blank\">https://dx.doi.org/10.1099/ijs.0.65153-0</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Ast, J.C.; Cleenwerck, I.; Engelbeen, K.; Urbanczyk, H.; Thompson, F.L.; De Vos, P.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Ast, J.C. <i>et al.</i>","Englishabstract":"Six representatives of a luminous bacterium commonly found in association with deep, cold-dwelling marine fishes were isolated from the light organs and skin of different fish species. These bacteria were Gram-negative, catalase-positive, and weakly oxidase-positive or oxidase-negative. Morphologically, cells of these strains were coccoid or coccoid-rods, occurring singly or in pairs, and motile by means of polar flagellation. After growth on seawater-based agar medium at 22 °C for 18 h, colonies were small, round and white, with an intense cerulean blue luminescence. Analysis of 16S rRNA gene sequence similarity placed these bacteria in the genus <i>Photobacterium</i>. Phylogenetic analysis based on seven housekeeping gene sequences (16S rRNA gene, <i>gapA</i>, <i>gyrB</i>, <i>pyrH</i>, <i>recA</i>, <i>rpoA</i> and <i>rpoD</i>), seven gene sequences of the <i>lux</i> operon (<i>luxC</i>, <i>luxD</i>, <i>luxA</i>, <i>luxB</i>, <i>luxF</i>, <i>luxE</i> and <i>luxG</i>) and four gene sequences of the <i>rib</i> operon (<i>ribE</i>, <i>ribB</i>, <i>ribH</i> and <i>ribA</i>), resolved the six strains as members of the genus <i>Photobacterium</i> and as a clade distinct from other species of <i>Photobacterium</i>. These strains were most closely related to <i>Photobacterium phosphoreum</i> and <i>Photobacterium iliopiscarium</i>. DNA–DNA hybridization values between the designated type strain, <i>Photobacterium kishitanii</i><i>pjapo</i>.1.1<sup>T</sup>, and <i>P</i>. <i>phosphoreum</i> LMG 4233<sup>T</sup>, <i>P</i>. <i>iliopiscarium</i> LMG 19543<sup>T</sup> and <i>Photobacterium indicum</i> LMG 22857<sup>T</sup> were 51, 43 and 19 %, respectively. In AFLP analysis, the six strains clustered together, forming a group distinct from other analysed species. The fatty acid C<sub>17 : 0</sub> cyclo was present in these bacteria, but not in <i>P</i>. <i>phosphoreum</i>, <i>P</i>. <i>iliopiscarium</i> or <i>P. indicum</i>. A combination of biochemical tests (arginine dihydrolase and lysine decarboxylase) differentiates these strains from <i>P</i>. <i>phosphoreum</i> and <i>P</i>. <i>indicum</i>. The DNA G+C content of <i>P. kishitanii pjapo</i>.1.1<sup>T</sup> is 40.2 %, and the genome size is approximately 4.2 Mbp, in the form of two circular chromosomes. These strains represent a novel species, for which the name <i>Photobacterium kishitanii</i> sp. nov. is proposed. The type strain, <i>pjapo</i>.1.1<sup>T</sup> (=ATCC BAA-1194<sup>T</sup>=LMG 23890<sup>T</sup>), is a luminous symbiont isolated from the light organ of the deep-water fish <i>Physiculus japonicus</i>.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"<i>Photobacterium kishitanii</i> sp nov., a luminous marine bacterium symbiotic with deep-sea fishes","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:01.897972","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2007,"MonPub":null,"DateUpdate":"2016-10-20","DateCreate":"2016-10-09","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000249961200025","VABBcode":null,"OpenAcc":0,"DOI":"10.1099/ijs.0.65153-0"},"refs":null,"anarec":{"AnaID":280837,"PubliDate":2007,"Pagination":"2073-2078","XtraPublOfAnaID":null,"ISBN":null,"Volume":"57","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":56795,"SerRR":"International Journal of Systematic and Evolutionary Microbiology. 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