{"refrec":{"BRefID":283820,"RR":"<b>Thompson, C.C.; Thompson, F.L.; Vandemeulebroecke, K.; Hoste, B.; Dawyndt, P.; Swings, J.</b> (2004). Use of <i>recA</i> as an alternative phylogenetic marker in the family <i>Vibrionaceae</i>. <i>Int. J. Syst. Evol. Microbiol. 54(3)</i>: 919-924. <a href=\"http://dx.doi.org/10.1099/ijs.0.02963-0\" target=\"_blank\">http://dx.doi.org/10.1099/ijs.0.02963-0</a>","BEntID":275839,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Int. J. Syst. Evol. Microbiol. 54(3)</i>: 919-924. <a href=\"http://dx.doi.org/10.1099/ijs.0.02963-0\" target=\"_blank\">http://dx.doi.org/10.1099/ijs.0.02963-0</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":1,"BrackishFlag":1,"TerrestrialFlag":0,"Authorstring":"Thompson, C.C.; Thompson, F.L.; Vandemeulebroecke, K.; Hoste, B.; Dawyndt, P.; Swings, J.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Thompson, C.C. <i>et al.</i>","Englishabstract":"This study analysed the usefulness of <i>recA</i> gene sequences as an alternative phylogenetic and/or identification marker for vibrios. The <i>recA</i> sequences suggest that the genus <i>Vibrio</i> is polyphyletic. The high heterogeneity observed within vibrios was congruent with former polyphasic taxonomic studies on this group. <i>Photobacterium</i> species clustered together and apparently nested within vibrios, while <i>Grimontia hollisae</i> was apart from other vibrios. Within the vibrios, <i>Vibrio cholerae</i> and <i>Vibrio mimicus</i> clustered apart from the other genus members. <i>Vibrio harveyi</i>- and <i>Vibrio splendidus</i>-related species formed compact separated groups. On the other hand, species related to <i>Vibrio tubiashii</i> appeared scattered in the phylogenetic tree. The pairs <i>Vibrio coralliilyticus</i> and <i>Vibrio neptunius</i>, <i>Vibrio nereis</i> and <i>Vibrio xuii</i> and <i>V. tubiashii</i> and <i>Vibrio brasiliensis</i> clustered completely apart from each other. There was a correlation of 0·58 between <i>recA</i> and 16S rDNA pairwise similarities. Strains of the same species have at least 94 % <i>recA</i> sequence similarity. <i>recA</i> gene sequences are much more discriminatory than 16S rDNA. For 16S rDNA similarity values above 98 % there was a wide range of <i>rec</i>A similarities, from 83 to 99 %.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Use of <i>recA</i> as an alternative phylogenetic marker in the family <i>Vibrionaceae</i>","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-06-15 01:32:58.566647","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2004,"MonPub":null,"DateUpdate":"2017-03-26","DateCreate":"2017-03-08","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000221579500042","VABBcode":null,"OpenAcc":1,"DOI":"10.1099/ijs.0.02963-0"},"refs":null,"anarec":{"AnaID":283820,"PubliDate":2004,"Pagination":"919-924","XtraPublOfAnaID":null,"ISBN":null,"Volume":"54","Issue":"3","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":56795,"SerRR":"International Journal of Systematic and Evolutionary Microbiology. Society for General Microbiology: Reading.  ISSN 1466-5026; e-ISSN 1466-5034","StandardTitleSer":"International Journal of Systematic and Evolutionary Microbiology","ISSN":"1466-5026","AbbrevSer":"Int. J. Syst. Evol. Microbiol.","StandardTitleMon":null,"StartPage":919,"Pages":6,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Thompson","Firstname":null,"Initials":"C.C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":275839,"AutID":37309,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Thompson","Firstname":null,"Initials":"F.L.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":275839,"AutID":243329,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Vandemeulebroecke","Firstname":null,"Initials":"K.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":275839,"AutID":37311,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Hoste","Firstname":null,"Initials":"B.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":275839,"AutID":37310,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Dawyndt","Firstname":null,"Initials":"P.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":275839,"AutID":241875,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Swings","Firstname":null,"Initials":"J.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":275839,"AutID":120055,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":300157,"LibID":36,"BRefID":283820,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"300157","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Society for General Microbiology","City":"Reading"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":[{"Collection":"OMA - Open Marien Archief","ShortName":"OMA"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"222":{"SpName":"BMB - Belgische Mariene Bibliografie","SpColID":222,"ParSpColID":null,"TopParID":null,"ShortName":"BMB","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"BMB"},"221":{"SpName":"OMA - Open Marien Archief","SpColID":221,"ParSpColID":null,"TopParID":null,"ShortName":"OMA","URLLocation":null,"LibID":36,"OpenRepoFlag":1,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"OMA"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":275839,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":275839,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"http://dx.doi.org/10.1099/ijs.0.02963-0","externalID":"10.1099/ijs.0.02963-0","URLTypeCode":"DOI","URLID":53784,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Bouchti, Zohra, Z.","newSesDate":{"date":"2017-03-08 11:35:20.940000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2017-03-26 20:55:55.823000","timezone_type":3,"timezone":"Europe/Brussels"}}}