{"refrec":{"BRefID":288087,"RR":"<b>Pettersen, R.; Johnsen, G.; Bruheim, P.; Andreassen, T.</b> (2013). Development of hyperspectral imaging as a bio-optical taxonomic tool for pigmented marine organisms. <i>Org. Divers. Evol. 14(2)</i>: 237-246. <a href=\"https://dx.doi.org/10.1007/s13127-013-0163-1\" target=\"_blank\">https://dx.doi.org/10.1007/s13127-013-0163-1</a>","BEntID":280112,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Org. Divers. Evol. 14(2)</i>: 237-246. <a href=\"https://dx.doi.org/10.1007/s13127-013-0163-1\" target=\"_blank\">https://dx.doi.org/10.1007/s13127-013-0163-1</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Pettersen, R.; Johnsen, G.; Bruheim, P.; Andreassen, T.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Pettersen, R. <i>et al.</i>","Englishabstract":"Reflection spectra obtained from hyperspectral imaging can be used as a bio-optical taxonomic identification tool if the pigment composition and the corresponding optical absorption signatures of an organism are known. In this study we elucidate species-specific absorption and corresponding reflection signatures of marine organisms and discuss optical fingerprints from underwater hyperspectral imaging (UHI) for future automated identification of organisms on the seafloor. When mounted on underwater robots, UHI has the potential to be a time- and cost-efficient identification and mapping method covering large areas over a short time. Hyperspectral imaging in vivo and in situ were used to obtain species-specific reflection signatures (optical fingerprints). High performance liquid chromatography, liquid chromatography–mass spectroscopy and nuclear magnetic resonance were used for pigment identification and to obtain species-specific absorption signatures of four marine benthic species; the spoonworm <i>Bonellia viridis</i>, and the sponges <i>Isodictya palmata, Hymedesmia paupertas</i> and <i>Hymedesima</i> sp. Species-specific optical fingerprints based on a UHI-based reflectance signature were verified successfully in the organisms investigated","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Development of hyperspectral imaging as a bio-optical taxonomic tool for pigmented marine organisms","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-05-12 01:33:17.524795","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Underwater hyperspectral imaging, Bio-optical taxonomy, Bonellia viridis, Isodictya palmata, Hymedesmia paupertas ","OtherDescriptors":null,"Notes":null,"AnaPub":2013,"MonPub":null,"DateUpdate":"2018-02-13","DateCreate":"2017-08-14","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000336080900008","VABBcode":null,"OpenAcc":0,"DOI":"10.1007/s13127-013-0163-1"},"refs":null,"anarec":{"AnaID":288087,"PubliDate":2013,"Pagination":"237-246","XtraPublOfAnaID":null,"ISBN":null,"Volume":"14","Issue":"2","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":61402,"SerRR":"Organisms Diversity & Evolution. Elsevier: Heidelberg.  ISSN 1439-6092; e-ISSN 1618-1077","StandardTitleSer":"Organisms Diversity & Evolution","ISSN":"1439-6092","AbbrevSer":"Org. Divers. Evol.","StandardTitleMon":null,"StartPage":237,"Pages":10,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Pettersen","Firstname":"Ragnhild","Initials":"R.","Affiliation":"Norwegian Univ Sci & Technol, Trondheim Biol Stn, Dept Biol, N-7491 Trondheim, Norway.","Discriminator":null,"CorporateFlag":0,"BEntID":280112,"AutID":305960,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Johnsen","Firstname":"Geir","Initials":"G.","Affiliation":"Norwegian Univ Sci & Technol, Trondheim Biol Stn, Dept Biol, N-7491 Trondheim, Norway.","Discriminator":null,"CorporateFlag":0,"BEntID":280112,"AutID":305961,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Bruheim","Firstname":"Per","Initials":"P.","Affiliation":"Norwegian Univ Sci & Technol, Dept Biotechnol, N-7491 Trondheim, Norway.","Discriminator":null,"CorporateFlag":0,"BEntID":280112,"AutID":305962,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Andreassen","Firstname":"Trygve","Initials":"T.","Affiliation":"Norwegian Univ Sci & Technol, Dept Biotechnol, N-7491 Trondheim, Norway.","Discriminator":null,"CorporateFlag":0,"BEntID":280112,"AutID":305963,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":null,"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Elsevier","City":"Heidelberg"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":[{"TaxTerm":"Bonellia viridis"},{"TaxTerm":"Hymedesmia paupertas"},{"TaxTerm":"Isodictya palmata"}],"geotermsASFA":null,"collections":[{"Collection":"VLIZ Acknowledged Publications","ShortName":"VLIZ ackn"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"941":{"SpName":"LifeWatch Species Information Backbone","SpColID":941,"ParSpColID":39,"TopParID":39,"ShortName":"LifeWatch Species Information Backbone","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone"},"39":{"SpName":"VLIZ Acknowledged Publications","SpColID":39,"ParSpColID":null,"TopParID":null,"ShortName":"VLIZ ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"VLIZ ackn"},"507":{"SpName":"World Register of Marine Species","SpColID":507,"ParSpColID":null,"TopParID":null,"ShortName":"WoRMS website","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"WoRMS website"},"915":{"SpName":"World Register of Marine Species (WoRMS) acknowledged","SpColID":915,"ParSpColID":941,"TopParID":39,"ShortName":"WoRMS ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn"},"947":{"SpName":"WoRMS ackn - direct reference","SpColID":947,"ParSpColID":915,"TopParID":39,"ShortName":"WoRMS ackn - direct","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn/WoRMS ackn - direct"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":280112,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":280112,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1007/s13127-013-0163-1","externalID":"10.1007/s13127-013-0163-1","URLTypeCode":"DOI","URLID":57126,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":[{"TaxTerm":"Bonellia viridis","AphiaID":110363,"TaxtID":43058},{"TaxTerm":"Hymedesmia paupertas","AphiaID":370778,"TaxtID":43152},{"TaxTerm":"Isodictya palmata","AphiaID":133247,"TaxtID":43155}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":[{"TaxTerm":"Bonellia viridis","DutchTerm":null,"AphiaID":110363,"TaxtID":43058},{"TaxTerm":"Hymedesmia paupertas","DutchTerm":null,"AphiaID":370778,"TaxtID":43152},{"TaxTerm":"Isodictya palmata","DutchTerm":null,"AphiaID":133247,"TaxtID":43155}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"VLIZ2000\\sielc","newSesDate":{"date":"2017-08-14 12:58:07.777000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2018-02-13 19:34:46.407000","timezone_type":3,"timezone":"Europe/Brussels"}}}