{"refrec":{"BRefID":288621,"RR":"<b>Kanyó, I.; Nagy, D.</b> (2014). Molecular identification key of the family <i>Streptococcaceae</i>. <i>Acta microbiologica et immunologica Hungarica 61(1)</i>: 27-48. <a href=\"https://dx.doi.org/10.1556/amicr.61.2014.1.4\" target=\"_blank\">https://dx.doi.org/10.1556/amicr.61.2014.1.4</a>","BEntID":280654,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":null,"RefStringPartII":". <i>Acta microbiologica et immunologica Hungarica 61(1)</i>: 27-48. <a href=\"https://dx.doi.org/10.1556/amicr.61.2014.1.4\" target=\"_blank\">https://dx.doi.org/10.1556/amicr.61.2014.1.4</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Kanyó, I.; Nagy, D.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Kanyó, I.; Nagy, D.","Englishabstract":"The gene order conservation (GOC) between the species of family <i>Streptococcaceae</i> was analysed. The rate of GOC in the strains belonging to the same species is 70% or more. When we compared different species belonging to the same genus, the rate of GOC was 30–47% while it was below 20% when the species were from different genera. A molecular identification key was established for identifying those genera and species within the family <i>Streptococcaceae</i> which have an already known full genome sequence (24 <i>Streptococcus</i> and 2 <i>Lactococcus</i> species). Identical genome parts of the species belonging to the same genus were used for determination of genera. These are the sections surrounding the replication origin <i>dnaA</i>, the sequence from gene <i>phaB</i> to the gene <i>accA</i>, and the sequence of <i>alr acpS secA</i>. Sections around the genes <i>pepX, leuS</i> and <i>rplM</i> were used for identifying the species. The gene order analysis and data in molecular identification key showed that <i>S. uberis</i> and <i>S. parauberis</i> also belong to the same species, and our suggestion for their new names is <i>S. uberis</i> subsp. <i>uberis</i> and <i>S uberis</i> subsp. <i>parauberis</i>. Based on this data, a new definition of bacterial species is proposed: two isolates belong to the same species if the order of the genes in their genomes is almost identical.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Molecular identification key of the family <i>Streptococcaceae</i>","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"molecular identification key, bacterial species definition, Streptococcaceae","OtherDescriptors":null,"Notes":null,"AnaPub":2014,"MonPub":null,"DateUpdate":"2018-02-13","DateCreate":"2017-08-23","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000332946000004","VABBcode":null,"OpenAcc":0,"DOI":"10.1556/amicr.61.2014.1.4"},"refs":null,"anarec":{"AnaID":288621,"PubliDate":2014,"Pagination":"27-48","XtraPublOfAnaID":null,"ISBN":null,"Volume":"61","Issue":"1","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":235552,"SerRR":"Acta microbiologica et immunologica Hungarica. Akademiai Kiado Rt.  ISSN 1217-8950; e-ISSN 1588-2640","StandardTitleSer":"Acta microbiologica et immunologica Hungarica","ISSN":"1217-8950","AbbrevSer":null,"StandardTitleMon":null,"StartPage":27,"Pages":22,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Kanyó","Firstname":"István","Initials":"I.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":280654,"AutID":268090,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Nagy","Firstname":"Dénes","Initials":"D.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":280654,"AutID":268091,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":null,"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Akademiai Kiado Rt","City":null}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"955":{"SpName":"Catalogue of Life acknowledged","SpColID":955,"ParSpColID":null,"TopParID":null,"ShortName":"Catalogue of Life ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"Catalogue of Life ackn"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":280654,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":280654,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1556/amicr.61.2014.1.4","externalID":"10.1556/amicr.61.2014.1.4","URLTypeCode":"DOI","URLID":57504,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"VLIZ2000\\sielc","newSesDate":{"date":"2017-08-23 08:59:33.357000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2018-02-13 19:34:46.407000","timezone_type":3,"timezone":"Europe/Brussels"}}}