{"refrec":{"BRefID":288665,"RR":"<b>Wagner, V.</b> (2016). A review of software tools for spell-checking taxon names in vegetation databases. <i>J. Veg. Sci. 27(6)</i>: 1323-1327. <a href=\"https://dx.doi.org/10.1111/jvs.12432\" target=\"_blank\">https://dx.doi.org/10.1111/jvs.12432</a>","BEntID":280700,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>J. Veg. Sci. 27(6)</i>: 1323-1327. <a href=\"https://dx.doi.org/10.1111/jvs.12432\" target=\"_blank\">https://dx.doi.org/10.1111/jvs.12432</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Wagner, V.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Wagner, V.","Englishabstract":"Correct spelling of taxon names in vegetation databases is a fundamental prerequisite for many data processing steps. However, manual detection and correction of spelling mistakes is inefficient, prone to errors and non-reproducible, especially when scanning large databases. Here, I review six software tools that spell-check taxon names in vegetation databases: (1) the Global Names Resolver, (2) the Interim Register of Marine and Nonmarine Genera, (3) the Taxonomic Name Resolution Service and R packages (4) Plantminer, (5) Taxonstand and (6) tpl. In particular, I test their capacity to spell-check names across the taxonomic ranks and organism groups frequently encountered in vegetation data and challenge their ability to screen names from different geographic regions. Performance by software tools differed widely in these tests. Backed up by multiple reference lists, the Global Names Resolver emerged as the most versatile software tool. All software solutions currently suffer from some minor limitations, including an inability to spell-check names of hybrid taxa. Furthermore, some spelling mistakes, by their nature, cannot be resolved unambiguously. Given these limitations, taxon names should be spell-checked with software tools in a semi-automatic rather than an automatic way.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"A review of software tools for spell-checking taxon names in vegetation databases","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-06-13 01:31:33.229726","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Big data; Biodiversity informatics; Eco-informatics; Name matching; Orthographic errors; Software; Spell-check; Spelling; Taxon; Taxonomic database; Vegetation database","OtherDescriptors":null,"Notes":null,"AnaPub":2016,"MonPub":null,"DateUpdate":"2018-02-13","DateCreate":"2017-08-23","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000389066400023","VABBcode":null,"OpenAcc":0,"DOI":"10.1111/jvs.12432"},"refs":null,"anarec":{"AnaID":288665,"PubliDate":2016,"Pagination":"1323-1327","XtraPublOfAnaID":null,"ISBN":null,"Volume":"27","Issue":"6","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":163046,"SerRR":"Journal of vegetation science. Opulus.  ISSN 1100-9233; e-ISSN 1654-1103","StandardTitleSer":"Journal of vegetation science","ISSN":"1100-9233","AbbrevSer":"J. Veg. Sci.","StandardTitleMon":null,"StartPage":1323,"Pages":5,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Wagner","Firstname":"Viktoria","Initials":"V.","Affiliation":"Masaryk Univ, Dept Bot & Zool, Kotlarska 2, CZ-61137 Brno, Czech Republic.","Discriminator":null,"CorporateFlag":0,"BEntID":280700,"AutID":296139,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":309897,"LibID":36,"BRefID":288665,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":null,"ShelfLocCode":"309897","RFID":null,"PaidValue":null,"Medium":"Server","Description":"Interne VLIZ documenten","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Non-open access","URL":null,"ClassifID":228,"Classification":"Non-open access","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":1,"Disclaimer":"Disclaimer_VLIZ_Intern","DutchDisclaimer":"<p>Deze publicatie is enkel beschikbaar voor persoonlijk gebruik binnen de Innovocean site <br />en mag op geen enkele manier verder worden verspreid.</p>","FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Opulus","City":null}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":[{"Collection":"VLIZ Acknowledged Publications","ShortName":"VLIZ ackn"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"955":{"SpName":"Catalogue of Life acknowledged","SpColID":955,"ParSpColID":null,"TopParID":null,"ShortName":"Catalogue of Life ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"Catalogue of Life ackn"},"942":{"SpName":"Interim Register of Marine and Nonmarine Genera (IRMNG) acknowledged","SpColID":942,"ParSpColID":941,"TopParID":39,"ShortName":"IRMNG ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/IRMNG ackn"},"941":{"SpName":"LifeWatch Species Information Backbone","SpColID":941,"ParSpColID":39,"TopParID":39,"ShortName":"LifeWatch Species Information Backbone","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone"},"39":{"SpName":"VLIZ Acknowledged Publications","SpColID":39,"ParSpColID":null,"TopParID":null,"ShortName":"VLIZ ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"VLIZ ackn"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":280700,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":280700,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1111/jvs.12432","externalID":"10.1111/jvs.12432","URLTypeCode":"DOI","URLID":57552,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"VLIZ2000\\sielc","newSesDate":{"date":"2017-08-23 08:59:33.357000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2018-02-13 19:34:46.407000","timezone_type":3,"timezone":"Europe/Brussels"}}}
