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Biodiversity within phytoplankton-associated microbiomes regulates host physiology, host community ecology, and nutrient cycling. <i>mSystems 10(2)</i>. <a href=\"https://dx.doi.org/10.1128/msystems.01462-24\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.01462-24</a>","StandardTitle":"Biodiversity within phytoplankton-associated microbiomes regulates host physiology, host community ecology, and nutrient cycling","AuthorsString":"Dickey, J.R. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":334823,"RR":"<b>Rubbens, P.; Props, R.</b> (2021). Computational analysis of microbial flow cytometry data. <i>mSystems 6(1)</i>: e00895-20. <a href=\"https://dx.doi.org/10.1128/msystems.00895-20\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00895-20</a>","StandardTitle":"Computational analysis of microbial flow cytometry data","AuthorsString":"Rubbens, P.; Props, R.","BibLvlCode":"AS"},{"BRefID":355139,"RR":"<b>Fu, S.; Yang, Q.; Wang, Q.; Pang, B.; Lan, R.; Wei, D.; Qu, B.; Liu, Y.</b> (2021). Continuous genomic surveillance monitored the <i>in vivo</i> evolutionary trajectories of <i>Vibrio parahaemolyticus</i> and identified a new virulent genotype. <i>mSystems 6(1)</i>: e01254-20. <a href=\"https://dx.doi.org/10.1128/msystems.01254-20\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.01254-20</a>","StandardTitle":"Continuous genomic surveillance monitored the <i>in vivo</i> evolutionary trajectories of <i>Vibrio parahaemolyticus</i> and identified a new virulent genotype","AuthorsString":"Fu, S. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":404691,"RR":"<b>Thobor, B.M.; Haas, A.F.; Wild, C.; Nelson, C.E.; Wegley Kelly, L.; Hehemann, J.-H.; Arts, M.G.I.; Boer, M.; Buck-Wiese, H.; Nguyen, N.P.; Hellige, I.; Mueller, B.</b> (2024). Coral high molecular weight carbohydrates support opportunistic microbes in bacterioplankton from an algae-dominated reef. <i>mSystems 9(11)</i>: e00832-24. <a href=\"https://dx.doi.org/10.1128/msystems.00832-24\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00832-24</a>","StandardTitle":"Coral high molecular weight carbohydrates support opportunistic microbes in bacterioplankton from an algae-dominated reef","AuthorsString":"Thobor, B.M. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":337441,"RR":"<b>Fu, S.; Wang, Q.; Zhang, Y.; Yang, Q.; Hao, J.; Liu, Y.; Pang, B.</b> (2021). Dynamics and microevolution of <i>Vibrio parahaemolyticus</i> populations in shellfish farms. <i>mSystems 6(1)</i>: e01161-20. <a href=\"https://hdl.handle.net/10.1128/mSystems.01161-20\" target=\"_blank\">https://hdl.handle.net/10.1128/mSystems.01161-20</a>","StandardTitle":"Dynamics and microevolution of <i>Vibrio parahaemolyticus</i> populations in shellfish farms","AuthorsString":"Fu, S. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":294019,"RR":"<b>Wegley Kelly, L.; Haas, A.F.; Nelson, C.E.</b> (2018). Ecosystem microbiology of coral reefs: linking genomic, metabolomic, and biogeochemical dynamics from animal symbioses to reefscape processes. <i>mSystems 3(2)</i>: e00162-17. <a href=\"https://dx.doi.org/10.1128/msystems.00162-17\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00162-17</a>","StandardTitle":"Ecosystem microbiology of coral reefs: linking genomic, metabolomic, and biogeochemical dynamics from animal symbioses to reefscape processes","AuthorsString":"Wegley Kelly, L. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":337961,"RR":"<b>Fu, S.; Wei, D.; Yang, Q.; Xie, G.; Pang, B.; Wang, Y.; Lan, R.; Wang, Q.; Dong, X.; Zhang, X.; Huang, J.; Feng, J.; Liu, Y.</b> (2020). Horizontal plasmid transfer promotes the dissemination of Asian acute hepatopancreatic necrosis disease and provides a novel mechanism for genetic exchange and environmental adaptation. <i>mSystems 5(2)</i>: e00799-19. <a href=\"https://hdl.handle.net/10.1128/mSystems.00799-19\" target=\"_blank\">https://hdl.handle.net/10.1128/mSystems.00799-19</a>","StandardTitle":"Horizontal plasmid transfer promotes the dissemination of Asian acute hepatopancreatic necrosis disease and provides a novel mechanism for genetic exchange and environmental adaptation","AuthorsString":"Fu, S. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":352834,"RR":"<b>Pinto, M.; Zhao, Z.; Klun, K.; Libowitzky, E.; Herndl, G.J.</b> (2022). Microbial consortiums of putative degraders of low-density polyethylene-associated compounds in the ocean. <i>mSystems 7(2)</i>: e01415-21. <a href=\"https://dx.doi.org/10.1128/msystems.01415-21\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.01415-21</a>","StandardTitle":"Microbial consortiums of putative degraders of low-density polyethylene-associated compounds in the ocean","AuthorsString":"Pinto, M. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":339955,"RR":"<b>Ahn, A.-C.; Jongepier, E.; Schuurmans, J.M.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S; Galinski, E.A.; Roman, P.; Sorokin, D.Y.; Muyzer, G.</b> (2021). Molecular and physiological adaptations to low temperature in <i>Thioalkalivibrio</i> strains isolated from soda lakes with different temperature regimes. <i>mSystems 6(2)</i>: e01202-20. <a href=\"https://dx.doi.org/10.1128/msystems.01202-20\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.01202-20</a>","StandardTitle":"Molecular and physiological adaptations to low temperature in <i>Thioalkalivibrio</i> strains isolated from soda lakes with different temperature regimes","AuthorsString":"Ahn, A.-C. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":437503,"RR":"<b>Hamm, J.N.</b> (2025). Nutrient availability affects optimal growth strategy in predatory DPANN. <i>mSystems 10(12)</i>: e01475-25. <a href=\"https://dx.doi.org/10.1128/msystems.01475-25\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.01475-25</a>","StandardTitle":"Nutrient availability affects optimal growth strategy in predatory DPANN","AuthorsString":"Hamm, J.N.","BibLvlCode":"AS"},{"BRefID":437469,"RR":"<b>Prokofeva, M.I.; Karaseva, A.I.; Tulenkov, A.S.; Klyukina, A.A.; Suzina, N.E.; Bale, N.J.; Mets, A.; Schleper, C.; Elcheninov, A.G.; Kochetkova, T.V.</b> (2025). Polysaccharide-degrading archaea dominate acidic hot springs: genomic and cultivation insights into a novel <i>Thermoproteota</i> lineage. <i>mSystems 10(10)</i>: e00710-25. <a href=\"https://dx.doi.org/10.1128/msystems.00710-25\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00710-25</a>","StandardTitle":"Polysaccharide-degrading archaea dominate acidic hot springs: genomic and cultivation insights into a novel <i>Thermoproteota</i> lineage","AuthorsString":"Prokofeva, M.I. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":348868,"RR":"<b>Heyse, J.; Schattenberg, F.; Rubbens, P.; Müller, S.; Waegeman, W.; Boon, N.; Props, R.</b> (2021). Predicting the presence and abundance of bacterial taxa in environmental communities through flow cytometric fingerprinting. <i>mSystems 6(5)</i>: e00551-21. <a href=\"https://dx.doi.org/10.1128/msystems.00551-21\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00551-21</a>","StandardTitle":"Predicting the presence and abundance of bacterial taxa in environmental communities through flow cytometric fingerprinting","AuthorsString":"Heyse, J. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":312235,"RR":"<b>Bayer, B.; Pelikan, C.; Bittner, M.J.; Reinthaler, T.; Könneke, M.; Herndl, G.; Offre, P.</b> (2019). Proteomic response of three marine ammonia-oxidizing archaea to hydrogen peroxide and their metabolic interactions with a heterotrophic alphaproteobacterium. <i>mSystems 4(4)</i>: e00181-19. <a href=\"https://dx.doi.org/10.1128/msystems.00181-19\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00181-19</a>","StandardTitle":"Proteomic response of three marine ammonia-oxidizing archaea to hydrogen peroxide and their metabolic interactions with a heterotrophic alphaproteobacterium","AuthorsString":"Bayer, B. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":321916,"RR":"<b>Rubbens, P.; Schmidt, M.L.; Props, R.; Biddanda, B.A.; Boon, N.; Waegeman, W.; Denef, V.J.</b> (2019). Randomized Lasso links microbial taxa with aquatic functional groups inferred from flow cytometry. <i>mSystems 4(5)</i>: e00093-19. <a href=\"https://dx.doi.org/10.1128/msystems.00093-19\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00093-19</a>","StandardTitle":"Randomized Lasso links microbial taxa with aquatic functional groups inferred from flow cytometry","AuthorsString":"Rubbens, P. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":291441,"RR":"<b>Schmidt, V.; Gomez-Chiarri, M.; Roy, C.; Smith, K.; Amaral-Zettler, L.</b> (2017). Subtle Microbiome Manipulation Using Probiotics Reduces Antibiotic-Associated Mortality in Fish. <i>mSystems 2(6)</i>: e00133-17. <a href=\"https://dx.doi.org/10.1128/msystems.00133-17\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00133-17</a>","StandardTitle":"Subtle Microbiome Manipulation Using Probiotics Reduces Antibiotic-Associated Mortality in Fish","AuthorsString":"Schmidt, V. <i>et al.</i>","BibLvlCode":"AS"},{"BRefID":360026,"RR":"<b>Zhang, Z.; Li, H.; Shen, W.; Feng, K.; Li, S.; Gu, S.; Zhou, Y.; Peng, X.; Du, X.; He, Q.; Wang, L.; Zhang, Z.; Wang, D.; Wang, Z.; Deng, Y.</b> (2022). The stability of phyto-zooplanktonic networks varied with zooplanktonic sizes in Chinese coastal ecosystem. <i>mSystems 7(5)</i>: 1-15. <a href=\"https://dx.doi.org/10.1128/msystems.00821-22\" target=\"_blank\">https://dx.doi.org/10.1128/msystems.00821-22</a>","StandardTitle":"The stability of phyto-zooplanktonic networks varied with zooplanktonic sizes in Chinese coastal ecosystem","AuthorsString":"Zhang, Z. <i>et al.</i>","BibLvlCode":"AS"}],"BEntOpen":283489,"BEntPrivate":null,"availability":null,"litstyles":null,"thespers":null,"arch2discl":805,"SERpubls":null,"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"805":{"SpName":"Koninklijk Nederlands Instituut voor Onderzoek der Zee","SpColID":805,"ParSpColID":null,"TopParID":null,"ShortName":"NIOZ","URLLocation":"https://www.vliz.be/imis/nioz/imis.php?refid=","LibID":2779,"OpenRepoFlag":1,"SpTypID":1,"TopParIDNotWebsite":null,"SpColPath":"NIOZ"}},"doi":null,"publs":[{"PublID":2140,"PublName":"American Society for Microbiology","InsID":null,"PersID":null,"INBOID":null,"OrderNr":1}],"serparttypes":["A"],"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":283489,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"http://msystems.asm.org","externalID":null,"URLTypeCode":null,"URLID":121211,"URLTypID":null,"URLType":null,"URLPrefix":null},{"URL":"https://doaj.org/toc/981dc446408b46cca06692c7613e89bf","externalID":null,"URLTypeCode":"DOAJ","URLID":126945,"URLTypID":48,"URLType":"DOAJ","URLPrefix":"https://doaj.org/"},{"URL":"https://journals.asm.org/journal/msystems","externalID":null,"URLTypeCode":null,"URLID":124236,"URLTypID":22,"URLType":"Journal home page","URLPrefix":null}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Chisala, Chilekwa, C.","newSesDate":{"date":"2017-12-14 08:33:00.383000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Bouchti, Zohra, Z.","updSesDate":{"date":"2023-11-20 08:38:17.370000","timezone_type":3,"timezone":"Europe/Brussels"}}}