{"refrec":{"BRefID":292335,"RR":"<b>Seeleuthner, Y.; Mondy, S.; Lombard, V.; Carradec, Q.; Pelletier, E.; Wessner, M.; Leconte, J.; Mangot, J.-F.; Poulain, J.; Labadie, K.; Logares, R.; Sunagawa, S.; de Berardinis, V.; Tara Oceans Coordinators; Pesant, S.; Poulton, N.; Stepanauskas, R.; Bork, P.; Bowler, C.; Hingamp, P.; Sullivan, M.B.; Iudicone, D.; Massana, R.; Aury, J.-M.; Henrissat, B.; Karsenti, E.; Jaillon, O.; Sieracki, M.; de Vargas, C.; Wincker, P.</b> (2018). Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. <i>Nature Comm. 9(1)</i>: 10 pp. <a href=\"https://dx.doi.org/10.1038/s41467-017-02235-3\" target=\"_blank\">https://dx.doi.org/10.1038/s41467-017-02235-3</a>","BEntID":284387,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Nature Comm. 9(1)</i>: 10 pp. <a href=\"https://dx.doi.org/10.1038/s41467-017-02235-3\" target=\"_blank\">https://dx.doi.org/10.1038/s41467-017-02235-3</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Seeleuthner, Y.; Mondy, S.; Lombard, V.; Carradec, Q.; Pelletier, E.; Wessner, M.; Leconte, J.; Mangot, J.-F.; Poulain, J.; Labadie, K.; Logares, R.; Sunagawa, S.; de Berardinis, V.; Tara Oceans Coordinators; Pesant, S.; Poulton, N.; Stepanauskas, R.; Bork, P.; Bowler, C.; Hingamp, P.; Sullivan, M.B.; Iudicone, D.; Massana, R.; Aury, J.-M.; Henrissat, B.; Karsenti, E.; Jaillon, O.; Sieracki, M.; de Vargas, C.; Wincker, P.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Seeleuthner, Y. <i>et al.</i>","Englishabstract":"Single-celled eukaryotes (protists) are critical players in global biogeochemical cycling of nutrients and energy in the oceans. While their roles as primary producers and grazers are well appreciated, other aspects of their life histories remain obscure due to challenges in culturing and sequencing their natural diversity. Here, we exploit single-cell genomics and metagenomics data from the circumglobal Tara Oceans expedition to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles. Based on the available data, each sequenced genome or genotype appears to have a specific oceanic distribution, principally correlated with water temperature and depth. The genome content provides hypotheses for specialization in terms of cell motility, food spectra, and trophic stages, including the potential impact on their lifestyles of horizontal gene transfer from prokaryotes. Our results support the idea that prominent heterotrophic marine protists perform diverse functions in ocean ecology.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-04-17 01:32:17.148538","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2018,"MonPub":null,"DateUpdate":"2018-02-13","DateCreate":"2018-02-01","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000422915700005","VABBcode":null,"OpenAcc":1,"DOI":"10.1038/s41467-017-02235-3"},"refs":null,"anarec":{"AnaID":292335,"PubliDate":2018,"Pagination":"10 pp","XtraPublOfAnaID":null,"ISBN":null,"Volume":"9","Issue":"1","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":198717,"SerRR":"Nature Communications. Nature Publishing Group: London.  ISSN 2041-1723; e-ISSN 2041-1723","StandardTitleSer":"Nature Communications","ISSN":"2041-1723","AbbrevSer":"Nature Comm.","StandardTitleMon":null,"StartPage":null,"Pages":null,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Seeleuthner","Firstname":"Yoann","Initials":"Y.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":245211,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Mondy","Firstname":"Samuel","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":245212,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Lombard","Firstname":"Vincent","Initials":"V.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":291195,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Carradec","Firstname":"Quentin","Initials":"Q.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":291151,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Pelletier","Firstname":"Eric","Initials":"E.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":132181,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Wessner","Firstname":"Marc","Initials":"M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":291196,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Leconte","Firstname":"Jade","Initials":"J.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":245210,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Mangot","Firstname":"Jean-François","Initials":"J.-F.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":248784,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Poulain","Firstname":"Julie","Initials":"J.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":49558,"OrderNr":9,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Labadie","Firstname":"Karine","Initials":"K.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":197324,"OrderNr":10,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Logares","Firstname":"Ramiro","Initials":"R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":197392,"OrderNr":11,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Sunagawa","Firstname":"Shinichi","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":197318,"OrderNr":12,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"de Berardinis","Firstname":"Véronique","Initials":"V.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":49559,"OrderNr":13,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Tara Oceans Coordinators","Firstname":null,"Initials":null,"Affiliation":null,"Discriminator":null,"CorporateFlag":1,"BEntID":284387,"AutID":291197,"OrderNr":14,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Pesant","Firstname":"Stéphane","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":126486,"OrderNr":15,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":"0000-0002-4936-5209","PersID":20767,"InsID":null},{"AutName":"Poulton","Firstname":"Nicole","Initials":"N.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":198446,"OrderNr":16,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Stepanauskas","Firstname":"Ramunas","Initials":"R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":160628,"OrderNr":17,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Bork","Firstname":"Peer","Initials":"P.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":52702,"OrderNr":18,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Bowler","Firstname":"Chris","Initials":"C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":209376,"OrderNr":19,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Hingamp","Firstname":"Pascal","Initials":"P.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":197351,"OrderNr":20,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Sullivan","Firstname":"Matthew","Initials":"M.B.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":40027,"OrderNr":21,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Iudicone","Firstname":"Daniele","Initials":"D.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":197352,"OrderNr":22,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Massana","Firstname":"Ramon","Initials":"R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":71311,"OrderNr":23,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Aury","Firstname":"Jean-Marc","Initials":"J.-M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":49531,"OrderNr":24,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Henrissat","Firstname":"Bernard","Initials":"B.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":209999,"OrderNr":25,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Karsenti","Firstname":"Eric","Initials":"E.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":197355,"OrderNr":26,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Jaillon","Firstname":"Olivier","Initials":"O.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":49530,"OrderNr":27,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Sieracki","Firstname":"Mike","Initials":"M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":291198,"OrderNr":28,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"de Vargas","Firstname":"Colomban","Initials":"C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":43589,"OrderNr":29,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Wincker","Firstname":"Patrick","Initials":"P.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":284387,"AutID":49586,"OrderNr":30,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":310539,"LibID":36,"BRefID":292335,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"310539","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Nature Publishing Group","City":"London"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":null,"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":284387,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":284387,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1038/s41467-017-02235-3","externalID":"10.1038/s41467-017-02235-3","URLTypeCode":"DOI","URLID":60420,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Chisala, Chilekwa, C.","newSesDate":{"date":"2018-02-01 09:10:40.557000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Lyssens, Liesbeth, L.","updSesDate":{"date":"2018-02-13 19:34:46.407000","timezone_type":3,"timezone":"Europe/Brussels"}}}
