{"refrec":{"BRefID":296577,"RR":"<b>Fišer, C.; Alther, R.; Zakšek, V.; Borko, S.; Fuchs, A.; Altermatt, F.</b> (2018). Translating <i>Niphargus</i> barcodes from Switzerland into taxonomy with a description of two new species (Amphipoda, Niphargidae). <i>ZooKeys 760</i>: 113-141. <a href=\"https://dx.doi.org/10.3897/zookeys.760.24978\" target=\"_blank\">https://dx.doi.org/10.3897/zookeys.760.24978</a>","BEntID":288666,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":null,"RefStringPartII":". <i>ZooKeys 760</i>: 113-141. <a href=\"https://dx.doi.org/10.3897/zookeys.760.24978\" target=\"_blank\">https://dx.doi.org/10.3897/zookeys.760.24978</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Fišer, C.; Alther, R.; Zakšek, V.; Borko, S.; Fuchs, A.; Altermatt, F.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Fišer, C. <i>et al.</i>","Englishabstract":"The amphipod genus <i>Niphargus</i> (Amphipoda: Niphargidae Bousfield, 1977) is the most species-rich genus of freshwater amphipods in the World. Species of this genus, which live almost exclusively in subterranean water, offer an interesting model system for basic and applied biodiversity science. Their use, however, is often limited due to the hitherto unresolved taxonomy within the whole genus. As a comprehensive taxonomic revision of the currently >425 Niphargus species is too demanding, it has been suggested that the taxonomy of the genus could be advanced in smaller steps, by reviewing regional faunas, that would eventually integrate into a global revision. In this study, we provide such a revision of <i>Niphargus</i> in Switzerland. First, we molecularly delimited, morphologically diagnosed, and formally described two new species, namely <i>Niphargus luchoffmann</i> sp. n. and <i>Niphargus tonywhitteni</i>i sp. n. Second, we updated and revised a checklist of <i>Niphargus</i> in Switzerland with new findings, and prepared a list of reference sequences for routine molecular identification, available at BOLD and GenBank. All available specimens of 22 known species from the area were morphologically examined, and their morphological variation was compiled in a data file of DEscription Language for TAxonomy, which can be used for automated generation of dichotomous or interactive keys. The data file is freely available at the World Amphipoda Database. Together, the checklist, the library of reference sequences, the DELTA file, but also a list of hitherto unresolved aspects are an important step towards a complete revision of the genus within a well-defined and biogeographically interesting area in Central Europe.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Translating <i>Niphargus</i> barcodes from Switzerland into taxonomy with a description of two new species (Amphipoda, Niphargidae)","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"barcodes; DELTA; integrative taxonomy; web-taxonomy","OtherDescriptors":null,"Notes":null,"AnaPub":2018,"MonPub":null,"DateUpdate":"2018-06-04","DateCreate":"2018-06-04","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000433179000006","VABBcode":null,"OpenAcc":1,"DOI":"10.3897/zookeys.760.24978"},"refs":null,"anarec":{"AnaID":296577,"PubliDate":2018,"Pagination":"113-141","XtraPublOfAnaID":null,"ISBN":null,"Volume":"760","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":188760,"SerRR":"ZooKeys. Pensoft: Sofia.  ISSN 1313-2989; e-ISSN 1313-2970","StandardTitleSer":"ZooKeys","ISSN":"1313-2989","AbbrevSer":"ZooKeys","StandardTitleMon":null,"StartPage":113,"Pages":29,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Fišer","Firstname":"Cene","Initials":"C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":288666,"AutID":331975,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Alther","Firstname":"Roman","Initials":"R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":288666,"AutID":331976,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Zakšek","Firstname":"Valerija","Initials":"V.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":288666,"AutID":331977,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Borko","Firstname":"Špela","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":288666,"AutID":331978,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Fuchs","Firstname":"Andreas","Initials":"A.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":288666,"AutID":331979,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Altermatt","Firstname":"Florian","Initials":"F.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":288666,"AutID":331980,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":313867,"LibID":36,"BRefID":296577,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"313867","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Pensoft","City":"Sofia"}],"MONpubls":null,"pictures":[],"thestermsPath":[{"ThesaurusTerm":"Groundwater","ThestID":61265,"Acronym":"CSA","ThesTermPath":"Groundwater"}],"thestermsASFA":[{"ThesaurusTerm":"Groundwater"}],"taxtermsASFA":[{"TaxTerm":"Amphipoda"},{"TaxTerm":"Niphargidae"}],"geotermsASFA":null,"collections":[{"Collection":"VLIZ Acknowledged Publications","ShortName":"VLIZ ackn"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"941":{"SpName":"LifeWatch Species Information Backbone","SpColID":941,"ParSpColID":39,"TopParID":39,"ShortName":"LifeWatch Species Information Backbone","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone"},"39":{"SpName":"VLIZ Acknowledged Publications","SpColID":39,"ParSpColID":null,"TopParID":null,"ShortName":"VLIZ ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"VLIZ ackn"},"507":{"SpName":"World Register of Marine Species","SpColID":507,"ParSpColID":null,"TopParID":null,"ShortName":"WoRMS website","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"WoRMS website"},"915":{"SpName":"World Register of Marine Species (WoRMS) acknowledged","SpColID":915,"ParSpColID":941,"TopParID":39,"ShortName":"WoRMS ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn"},"947":{"SpName":"WoRMS ackn - direct reference","SpColID":947,"ParSpColID":915,"TopParID":39,"ShortName":"WoRMS ackn - direct","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn/WoRMS ackn - direct"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":288666,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":288666,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.3897/zookeys.760.24978","externalID":"10.3897/zookeys.760.24978","URLTypeCode":"DOI","URLID":65428,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":[{"ThesaurusTerm":"Groundwater","ThestID":61265,"Acronym":"CSA","ThesTypID":2,"ThesType":"CSA Technology Research Database Master Thesaurus"}],"taxterms":[{"TaxTerm":"Amphipoda [amphipods]","AphiaID":1135,"TaxtID":15639},{"TaxTerm":"Niphargidae","AphiaID":545660,"TaxtID":44058}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":[{"ThesaurusTerm":"Groundwater","DutchTerm":null,"ThestID":61265,"Acronym":"CSA","ThesTypID":2,"ThesType":"CSA Technology Research Database Master Thesaurus"}],"taxtermsFRIS":[{"TaxTerm":"Amphipoda","DutchTerm":"Vlokreeften","AphiaID":1135,"TaxtID":15639},{"TaxTerm":"Niphargidae","DutchTerm":null,"AphiaID":545660,"TaxtID":44058}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Chisala, Chilekwa, C.","newSesDate":{"date":"2018-06-04 10:26:34.697000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Chisala, Chilekwa, C.","updSesDate":{"date":"2018-06-04 10:26:34.697000","timezone_type":3,"timezone":"Europe/Brussels"}}}
