{"refrec":{"BRefID":299999,"RR":"<b>Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Hopmans, E.C.; den Uijl, M.J.; Weijers, J.W.H.; Schouten, S.</b> (2018). The enigmatic structure of the crenarchaeol isomer. <i>Org. Geochem. 124</i>: 22-28. <a href=\"https://dx.doi.org/10.1016/j.orggeochem.2018.06.005\" target=\"_blank\">https://dx.doi.org/10.1016/j.orggeochem.2018.06.005</a>","BEntID":292218,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":null,"RefStringPartII":". <i>Org. Geochem. 124</i>: 22-28. <a href=\"https://dx.doi.org/10.1016/j.orggeochem.2018.06.005\" target=\"_blank\">https://dx.doi.org/10.1016/j.orggeochem.2018.06.005</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Hopmans, E.C.; den Uijl, M.J.; Weijers, J.W.H.; Schouten, S.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Sinninghe Damsté, J.S. <i>et al.</i>","Englishabstract":"Isolation of crenarchaeol and its isomer from marine surface sediments, followed by ether cleavage and GC–MS characterization using supersonic molecular beam (SMB) ionization of the biphytanes formed, revealed that the crenarchaeol isomer comprises a tricyclic biphytane that is stereochemically different from the tricyclic biphytane of crenarchaeol. This isomeric tricyclic biphytane was also released from the crenarchaeol isomer in extant Thaumarchaeotal biomass. Reinterpretation of previously obtained <sup>13</sup>C NMR data of the crenarchaeol isomer suggested that the cyclopentane moiety adjacent to the cyclohexyl moiety of the tricyclic biphytane of the crenarcheaol isomers possesses the unusual cis stereochemistry in comparison to the <i>trans</i> stereochemistry of all cyclopentane moieties in crenarchaeol. This stereochemical difference likely affects the packing of lipid membranes of Thaumarchaeota and therefore provides a biophysical explanation for the role of the crenarchaeol isomer in the TEX<sub>86</sub> palaeothermometer based on fossilized Thaumarcheotal lipids.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"The enigmatic structure of the crenarchaeol isomer","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Crenarchaeol; Structural determination;TEX<sub>86</sub>; Archaea; Thaumarchaeota; GDGTs","OtherDescriptors":null,"Notes":null,"AnaPub":2018,"MonPub":null,"DateUpdate":"2018-07-31","DateCreate":"2018-07-31","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000443952100003","VABBcode":null,"OpenAcc":1,"DOI":"10.1016/j.orggeochem.2018.06.005"},"refs":null,"anarec":{"AnaID":299999,"PubliDate":2018,"Pagination":"22-28","XtraPublOfAnaID":null,"ISBN":null,"Volume":"124","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":111331,"SerRR":"Organic Geochemistry. Elsevier: Oxford; New York.  ISSN 0146-6380; e-ISSN 1873-5290","StandardTitleSer":"Organic Geochemistry","ISSN":"0146-6380","AbbrevSer":"Org. Geochem.","StandardTitleMon":null,"StartPage":22,"Pages":7,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Sinninghe Damsté","Firstname":"Jaap","Initials":"J.S.","Affiliation":"MMB","Discriminator":null,"CorporateFlag":0,"BEntID":292218,"AutID":214917,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"MMB","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry","ORCID":"0000-0002-8683-1854","PersID":29942,"InsID":13655},{"AutName":"Rijpstra","Firstname":"W. Irene","Initials":"W.I.C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":292218,"AutID":214855,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"MMB","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry","ORCID":null,"PersID":29917,"InsID":13655},{"AutName":"Hopmans","Firstname":"Ellen","Initials":"E.C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":292218,"AutID":210356,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"MMB","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry","ORCID":"0000-0002-8209-1334","PersID":29774,"InsID":13655},{"AutName":"den Uijl","Firstname":"Mimi","Initials":"M.J.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":292218,"AutID":338456,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Weijers","Firstname":"Johan","Initials":"J.W.H.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":292218,"AutID":338457,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Schouten","Firstname":"Stefan","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":292218,"AutID":210357,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"MMB","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry","ORCID":null,"PersID":15342,"InsID":13655}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":292218,"BEntPrivate":null,"availability":[{"BInstID":317068,"LibID":2779,"BRefID":299999,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"317068","RFID":null,"PaidValue":null,"Medium":"Server","Description":null,"Acronym":null,"Library":"NIOZ","DutchTerm":null,"URL":null,"ClassifID":260,"Classification":"NIOZ Open Repository","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":null,"LoggedInReq":null,"Disclaimer":"Disclaimer_NIOZ","DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":397,"FileFormID":6,"LendableFlag":null,"PublicFlag":1,"orderLib":"NIOZ","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":805,"SERpubls":[{"PublName":"Elsevier","City":"Oxford; New York"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":[{"TaxTerm":"archaea"},{"TaxTerm":"Thaumarchaeota"}],"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"805":{"SpName":"Koninklijk Nederlands Instituut voor Onderzoek der Zee","SpColID":805,"ParSpColID":null,"TopParID":null,"ShortName":"NIOZ","URLLocation":"https://www.vliz.be/imis/nioz/imis.php?refid=","LibID":2779,"OpenRepoFlag":1,"SpTypID":1,"TopParIDNotWebsite":null,"SpColPath":"NIOZ"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":292218,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":292218,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1016/j.orggeochem.2018.06.005","externalID":"10.1016/j.orggeochem.2018.06.005","URLTypeCode":"DOI","URLID":66497,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":[{"TaxTerm":"archaea","AphiaID":8,"TaxtID":39154},{"TaxTerm":"Thaumarchaeota","AphiaID":559429,"TaxtID":40284}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":[{"TaxTerm":"archaea","DutchTerm":null,"AphiaID":8,"TaxtID":39154},{"TaxTerm":"Thaumarchaeota","DutchTerm":null,"AphiaID":559429,"TaxtID":40284}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Marlies.Bruining@nioz.nl","newSesDate":{"date":"2018-07-31 14:01:35.347000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Leonne.van.der.Weegen@nioz.nl","updSesDate":{"date":"2018-07-31 10:10:12.527000","timezone_type":3,"timezone":"Europe/Brussels"}}}
