{"refrec":{"BRefID":303611,"RR":"<b>Martin, R.M.; Moniruzzaman, M.; Mucci, N.C.; Willis, A.; Woodhouse, J.N.; Xian, Y.; Xiao, C.; Brussaard, C.P.D.; Wilhelm, S.W.</b> (2019). <i>Cylindrospermopsis raciborskii</i> Virus and host: genomic characterization and ecological relevance. <i>Environ. Microbiol. 21(6)</i>: 1942-1956. <a href=\"https://doi.org/10.1111/1462-2920.14425\" target=\"_blank\">https://doi.org/10.1111/1462-2920.14425</a>","BEntID":295905,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Environ. Microbiol. 21(6)</i>: 1942-1956. <a href=\"https://doi.org/10.1111/1462-2920.14425\" target=\"_blank\">https://doi.org/10.1111/1462-2920.14425</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Martin, R.M.; Moniruzzaman, M.; Mucci, N.C.; Willis, A.; Woodhouse, J.N.; Xian, Y.; Xiao, C.; Brussaard, C.P.D.; Wilhelm, S.W.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Martin, R.M. <i>et al.</i>","Englishabstract":"<i>Cylindrospermopsis (Raphidiopsis) raciborskii</i>is an invasive, filamentous, nitrogen‐fixing cyanobacterium that forms frequent blooms in freshwater habitats. While viruses play key roles in regulating the abundance, production and diversity of their hosts in aquatic ecosystems, the role(s) of viruses in the ecology of <i>C. raciborskii</i> is almost unexplored. Progress in this field has been hindered by the absence of a characterized virus–host system in <i>C. raciborskii</i> To bridge this gap, we sequenced the genome of CrV‐01T, a previously isolated cyanosiphovirus, and its host, <i>C. raciborskii</i> strain Cr2010. Analyses suggest that CrV‐01T represents a distinct clade of siphoviruses infecting, and perhaps lysogenizing, filamentous cyanobacteria. Its genome contains unique features that include an intact CRISPR array and a 12 kb inverted duplication. Evidence suggests CrV‐01T recently gained the ability to infect Cr2010 and recently lost the ability to form lysogens. The cyanobacterial host contains a CRISPR‐Cas system with CRISPR spacers matching protospacers within the inverted duplication of the CrV‐01T genome. Examination of metagenomes demonstrates that viruses with high genetic identity to CrV‐01T, but lacking the inverted duplication, are present in <i>C. raciborskii</i> blooms in Australia. The unique genomic features of the CrV/Cr2010 system offers opportunities to investigate in more detail virus–host interactions in an ecologically important bloom‐forming cyanobacterium.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"<i>Cylindrospermopsis raciborskii</i> Virus and host: genomic characterization and ecological relevance","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:01.897972","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2019,"MonPub":null,"DateUpdate":"2019-06-03","DateCreate":"2018-12-04","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000469995900005","VABBcode":null,"OpenAcc":0,"DOI":"10.1111/1462-2920.14425"},"refs":null,"anarec":{"AnaID":303611,"PubliDate":2019,"Pagination":"1942-1956","XtraPublOfAnaID":null,"ISBN":null,"Volume":"21","Issue":"6","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":59926,"SerRR":"Environmental Microbiology. Blackwell Scientific Publishers: Oxford.  ISSN 1462-2912; e-ISSN 1462-2920","StandardTitleSer":"Environmental Microbiology","ISSN":"1462-2912","AbbrevSer":"Environ. Microbiol.","StandardTitleMon":null,"StartPage":1942,"Pages":15,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Martin","Firstname":"Robbie","Initials":"R.M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":352037,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Moniruzzaman","Firstname":"Mohammad","Initials":"M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":352038,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Mucci","Firstname":"Nicholas","Initials":"N.C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":352039,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Willis","Firstname":"Anusuya","Initials":"A.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":83865,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Woodhouse","Firstname":"Jason","Initials":"J.N.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":249644,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Xian","Firstname":"Yuejiao","Initials":"Y.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":352042,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Xiao","Firstname":"Chuan","Initials":"C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":352043,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Brussaard","Firstname":"Corina","Initials":"C.P.D.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":207976,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"MMB","InsFSN":"Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry","ORCID":null,"PersID":10995,"InsID":13655},{"AutName":"Wilhelm","Firstname":"Steven","Initials":"S.W.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":295905,"AutID":2040,"OrderNr":9,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":295905,"BEntPrivate":null,"availability":[{"BInstID":329448,"LibID":2779,"BRefID":303611,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":null,"ShelfLocCode":"329448","RFID":null,"PaidValue":null,"Medium":"Server","Description":null,"Acronym":null,"Library":"NIOZ","DutchTerm":null,"URL":null,"ClassifID":261,"Classification":"NIOZ files","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":null,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":397,"FileFormID":6,"LendableFlag":null,"PublicFlag":1,"orderLib":"NIOZ","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":805,"SERpubls":[{"PublName":"Blackwell Scientific Publishers","City":"Oxford"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"805":{"SpName":"Koninklijk Nederlands Instituut voor Onderzoek der Zee","SpColID":805,"ParSpColID":null,"TopParID":null,"ShortName":"NIOZ","URLLocation":"https://www.vliz.be/imis/nioz/imis.php?refid=","LibID":2779,"OpenRepoFlag":1,"SpTypID":1,"TopParIDNotWebsite":null,"SpColPath":"NIOZ"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":295905,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":295905,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://doi.org/10.1111/1462-2920.14425","externalID":"10.1111/1462-2920.14425","URLTypeCode":"DOI","URLID":69094,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Marlies.Bruining@nioz.nl","newSesDate":{"date":"2018-12-04 11:22:46.270000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Leonne.van.der.Weegen@nioz.nl","updSesDate":{"date":"2019-06-03 11:04:09.160000","timezone_type":3,"timezone":"Europe/Brussels"}}}
