{"refrec":{"BRefID":304662,"RR":"<b>Niu, J.-Y.; Li, L.; Shi, S.; Li, H.; Wang, X.-R.; Liu, Y.-Y.; Niu, Y.-L.; Zhao, J.-C.</b> (2018). ­Phylogenetic analysis of the genus <i>Pohlia</i> (Bryophyta, Bryaceae) using chloroplast and nuclear ribosomal DNA. <i>Phytotaxa 351(2)</i>: 141-153. <a href=\"https://dx.doi.org/10.11646/phytotaxa.351.2.2\" target=\"_blank\">https://dx.doi.org/10.11646/phytotaxa.351.2.2</a>","BEntID":296957,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Phytotaxa 351(2)</i>: 141-153. <a href=\"https://dx.doi.org/10.11646/phytotaxa.351.2.2\" target=\"_blank\">https://dx.doi.org/10.11646/phytotaxa.351.2.2</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Niu, J.-Y.; Li, L.; Shi, S.; Li, H.; Wang, X.-R.; Liu, Y.-Y.; Niu, Y.-L.; Zhao, J.-C.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Niu, J.-Y. <i>et al.</i>","Englishabstract":"The genus <em>Pohlia</em> Hedwig is a large moss genus that has been placed in the Bryaceae family as traditionally determined. However, a molecular phylogenetic analysis has indicated that the <em>Pohlia</em> genus is more closely related to genera that are traditionally classified into the Mniaceae or Mielichhoferiaceae families. In this study, we performed a molecular phylogenetic analysis using evidence from four chloroplast regions (<em>atpB-rbcL</em>, <em>rps4</em>, <em>trnG</em>, and <em>trnL-trnF</em>) and one nuclear ribosomal intragenic spacer region (ITS) using different methods (maximum parsimony, maximum likelihood, and Bayesian inference). The phylogenetic relationships between <em>Pohlia</em> and its related genera are discussed.</p><p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Two large clades among our samples were well supported in all of the datasets. The traditionally defined Bryaceae species, including <em>Brachymenium pendulum</em>, <em>Bryum caespiticium</em>, <em>Bryum capillare</em>,<em> Anomobryum gemmigerum</em>, and <em>Rhodobryum ontariense</em>, formed a monophyletic clade with high support. The second clade corresponding to the Mielichhoferiaceae-Mniaceae complex also had high support. All of the <em>Pohlia</em>, <em>Mielichhoferia</em> and Mniaceae samples were included in this latter clade.</p><p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; The clearest result from the phylogenetic analysis is that the <em>Pohlia</em> genus is non-monophyletic. The analysis is identical when using three methods and concludes that <em>Pohlia</em> is closer to the genera in Mielichhoferiaceae and Mniaceae. A formal taxonomic treatment of this clade was not performed because we lacked sufficient specimens of the species, although this work will be included in a future study.</p>","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"­Phylogenetic analysis of the genus <i>Pohlia</i> (Bryophyta, Bryaceae) using chloroplast and nuclear ribosomal DNA","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Bryales, molecular phylogenetics, moss DNA Barcodes, Bryophytes","OtherDescriptors":null,"Notes":null,"AnaPub":2018,"MonPub":null,"DateUpdate":"2019-01-21","DateCreate":"2019-01-21","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000434192100002","VABBcode":null,"OpenAcc":0,"DOI":"10.11646/phytotaxa.351.2.2"},"refs":null,"anarec":{"AnaID":304662,"PubliDate":2018,"Pagination":"141-153","XtraPublOfAnaID":null,"ISBN":null,"Volume":"351","Issue":"2","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":231841,"SerRR":"Phytotaxa. Magnolia Press: Auckland.  ISSN 1179-3155; e-ISSN 1179-3163","StandardTitleSer":"Phytotaxa","ISSN":"1179-3155","AbbrevSer":"Phytotaxa","StandardTitleMon":null,"StartPage":141,"Pages":13,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Niu","Firstname":"Jing-Yuan","Initials":"J.-Y.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358950,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Li","Firstname":"Lin","Initials":"L.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358951,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Shi","Firstname":"Shuo","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358952,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Li","Firstname":"Hui","Initials":"H.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":204113,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Wang","Firstname":"Xiao-Rui","Initials":"X.-R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358954,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Liu","Firstname":"Yong-Ying","Initials":"Y.-Y.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358955,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Niu","Firstname":"Yu-Lu","Initials":"Y.-L.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358956,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Zhao","Firstname":"Jian-Cheng","Initials":"J.-C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":296957,"AutID":358957,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":322593,"LibID":36,"BRefID":304662,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":null,"ShelfLocCode":"322593","RFID":null,"PaidValue":null,"Medium":"Server","Description":"Interne VLIZ documenten","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Non-open access","URL":null,"ClassifID":228,"Classification":"Non-open access","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":1,"Disclaimer":"Disclaimer_VLIZ_Intern","DutchDisclaimer":"<p>Deze publicatie is enkel beschikbaar voor persoonlijk gebruik binnen de Innovocean site <br />en mag op geen enkele manier verder worden verspreid.</p>","FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Magnolia Press","City":"Auckland"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":[{"TaxTerm":"Bryales"},{"TaxTerm":"Bryophyta"}],"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":{"955":{"SpName":"Catalogue of Life acknowledged","SpColID":955,"ParSpColID":null,"TopParID":null,"ShortName":"Catalogue of Life ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"Catalogue of Life ackn"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":296957,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":296957,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.11646/phytotaxa.351.2.2","externalID":"10.11646/phytotaxa.351.2.2","URLTypeCode":"DOI","URLID":69894,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":[{"TaxTerm":"Bryales","AphiaID":426092,"TaxtID":47139},{"TaxTerm":"Bryophyta","AphiaID":147480,"TaxtID":24485}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":[{"TaxTerm":"Bryales","DutchTerm":null,"AphiaID":426092,"TaxtID":47139},{"TaxTerm":"Bryophyta","DutchTerm":"Mossen","AphiaID":147480,"TaxtID":24485}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Bouchti, Zohra, Z.","newSesDate":{"date":"2019-01-21 08:52:43.683000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Bouchti, Zohra, Z.","updSesDate":{"date":"2019-01-21 08:52:43.683000","timezone_type":3,"timezone":"Europe/Brussels"}}}
