{"refrec":{"BRefID":318036,"RR":"<b>ten Hoopen, P.; Amid, C.; Buttigieg, P.L.; Pafilis, E.; Bravakos, P.; Cerdeño-Tárraga, A.M.; Gibson, R.; Kahlke, T.; Legaki, A.; Narayana Murthy, K.; Papastefanou, G.; Pereira, E.; Rossello, M.; Toribio, A.L.; Cochrane, G.</b> (2016). Value, but high costs in post-deposition data curation. <i>Database 2016</i>: bav126. <a href=\"https://dx.doi.org/10.1093/database/bav126\" target=\"_blank\">https://dx.doi.org/10.1093/database/bav126</a>","BEntID":311473,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Database 2016</i>: bav126. <a href=\"https://dx.doi.org/10.1093/database/bav126\" target=\"_blank\">https://dx.doi.org/10.1093/database/bav126</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"ten Hoopen, P.; Amid, C.; Buttigieg, P.L.; Pafilis, E.; Bravakos, P.; Cerdeño-Tárraga, A.M.; Gibson, R.; Kahlke, T.; Legaki, A.; Narayana Murthy, K.; Papastefanou, G.; Pereira, E.; Rossello, M.; Toribio, A.L.; Cochrane, G.","OrigTitleTranslFlag":0,"Authorstringtrunc":"ten Hoopen, P. <i>et al.</i>","Englishabstract":"Discoverability of sequence data in primary data archives is proportional to the richness of contextual information associated with the data. Here, we describe an exercise in the improvement of contextual information surrounding sample records associated with metagenomics sequence reads available in the European Nucleotide Archive. We outline the annotation process and summarize findings of this effort aimed at increasing usability of publicly available environmental data. Furthermore, we emphasize the benefits of such an exercise and detail its costs. We conclude that such a third party annotation approach is expensive and has value as an element of curation, but should form only part of a more sustainable submitter-driven approach.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Value, but high costs in post-deposition data curation","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-06-01 01:32:00.519030","timezone_type":1,"timezone":"+02:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2016,"MonPub":null,"DateUpdate":"2019-11-20","DateCreate":"2019-11-20","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000370929700001","VABBcode":null,"OpenAcc":1,"DOI":"10.1093/database/bav126"},"refs":null,"anarec":{"AnaID":318036,"PubliDate":2016,"Pagination":"bav126","XtraPublOfAnaID":null,"ISBN":null,"Volume":"2016","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":244393,"SerRR":"Database: The Journal of Biological Databases and Curation. Oxford University Press: Oxford.  ISSN 1758-0463; e-ISSN 1758-0463","StandardTitleSer":"Database: The Journal of Biological Databases and Curation","ISSN":"1758-0463","AbbrevSer":"Database","StandardTitleMon":null,"StartPage":null,"Pages":null,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"ten Hoopen","Firstname":"Petra","Initials":"P.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":198490,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Amid","Firstname":"Clara","Initials":"C.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":344134,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Buttigieg","Firstname":"Pier Luigi","Initials":"P.L.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":268038,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Pafilis","Firstname":"Evangelos","Initials":"E.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":234152,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Bravakos","Firstname":"Panos","Initials":"P.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":385746,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Cerdeño-Tárraga","Firstname":"Ana","Initials":"A.M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396303,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Gibson","Firstname":"Richard","Initials":"R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396304,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Kahlke","Firstname":"Tim","Initials":"T.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396305,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Legaki","Firstname":"Aglaia","Initials":"A.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":234158,"OrderNr":9,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Narayana Murthy","Firstname":"Kada","Initials":"K.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396307,"OrderNr":10,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Papastefanou","Firstname":"Gabriella","Initials":"G.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":234162,"OrderNr":11,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Pereira","Firstname":"Emiliano","Initials":"E.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396309,"OrderNr":12,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Rossello","Firstname":"Marc","Initials":"M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396310,"OrderNr":13,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Toribio","Firstname":"Ana","Initials":"A.L.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":396311,"OrderNr":14,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Cochrane","Firstname":"Guy","Initials":"G.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":311473,"AutID":84064,"OrderNr":15,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":340435,"LibID":36,"BRefID":318036,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"340435","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Oxford University Press","City":"Oxford"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":[{"Collection":"VLIZ Acknowledged Publications","ShortName":"VLIZ ackn"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"941":{"SpName":"LifeWatch Species Information Backbone","SpColID":941,"ParSpColID":39,"TopParID":39,"ShortName":"LifeWatch Species Information Backbone","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone"},"793":{"SpName":"Marine Regions acknowledged","SpColID":793,"ParSpColID":941,"TopParID":39,"ShortName":"Marine Regions ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/Marine Regions ackn"},"39":{"SpName":"VLIZ Acknowledged Publications","SpColID":39,"ParSpColID":null,"TopParID":null,"ShortName":"VLIZ ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"VLIZ ackn"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":311473,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":311473,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1093/database/bav126","externalID":"10.1093/database/bav126","URLTypeCode":"DOI","URLID":79645,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Bouchti, Zohra, Z.","newSesDate":{"date":"2019-11-20 08:10:54.943000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Bouchti, Zohra, Z.","updSesDate":{"date":"2019-11-20 08:10:54.943000","timezone_type":3,"timezone":"Europe/Brussels"}}}
