{"refrec":{"BRefID":323981,"RR":"<b>Moro, G.; Buonocore, F.; Barucca, M.; Spazzali, F.; Canapa, A.; Pallavicini, A.; Scapigliati, G.; Gerdol, M.</b> (2019). The first transcriptomic resource for the Antarctic scallop <i>Adamussium colbecki</i>. <i>Marine Genomics 44</i>: 61-64. <a href=\"https://dx.doi.org/10.1016/j.margen.2018.09.007\" target=\"_blank\">https://dx.doi.org/10.1016/j.margen.2018.09.007</a>","BEntID":317453,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Marine Genomics 44</i>: 61-64. <a href=\"https://dx.doi.org/10.1016/j.margen.2018.09.007\" target=\"_blank\">https://dx.doi.org/10.1016/j.margen.2018.09.007</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Moro, G.; Buonocore, F.; Barucca, M.; Spazzali, F.; Canapa, A.; Pallavicini, A.; Scapigliati, G.; Gerdol, M.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Moro, G. <i>et al.</i>","Englishabstract":"<em>Adamussium colbecki</em> is one of the most common bivalve mollusks found in the coastal waters of the Antarctic continent. Its widespread distribution, easiness of collection and sensitivity to slight alterations of water temperature and presence of pollutants make this cold-adapted scallop a potentially interesting sentinel species for the biomonitoring of the impact of anthropic activities on the Antarctic benthic communities. However, while the availability of genetic and molecular data would represent a resource of the utmost importance to enable the use of this species as a model for environmental studies, this data is presently nearly non-existing. Here we report a high quality <em>de novo</em> assembled and annotated transcriptome for <em>A. colbecki</em>, discussing the long-debated phylogenetic position of this species within the order Pectinida through a Bayesian phylogenomics approach, based on the concatenated multiple sequence alignment of 978 universally conserved orthologous genes.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"The first transcriptomic resource for the Antarctic scallop <i>Adamussium colbecki</i>","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Adamussium colbecki; Antarctica; Transcriptome; Bivalve; Pectinida; Phylogenomics","OtherDescriptors":null,"Notes":null,"AnaPub":2019,"MonPub":null,"DateUpdate":"2020-05-14","DateCreate":"2020-05-14","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000462800700008","VABBcode":null,"OpenAcc":0,"DOI":"10.1016/j.margen.2018.09.007"},"refs":null,"anarec":{"AnaID":323981,"PubliDate":2019,"Pagination":"61-64","XtraPublOfAnaID":null,"ISBN":null,"Volume":"44","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":126432,"SerRR":"Marine Genomics. Elsevier: Amsterdam.  ISSN 1874-7787; e-ISSN 1876-7478","StandardTitleSer":"Marine Genomics","ISSN":"1874-7787","AbbrevSer":"Marine Genomics","StandardTitleMon":null,"StartPage":61,"Pages":4,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Moro","Firstname":"Giulia","Initials":"G.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":414773,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Buonocore","Firstname":"Francesco","Initials":"F.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":50881,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Barucca","Firstname":"Marco","Initials":"M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":151623,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Spazzali","Firstname":"Francesca","Initials":"F.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":398137,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Canapa","Firstname":"Adriana","Initials":"A.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":151628,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Pallavicini","Firstname":"Alberto","Initials":"A.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":243496,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Scapigliati","Firstname":"Giuseppe","Initials":"G.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":50886,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Gerdol","Firstname":"Marco","Initials":"M.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":317453,"AutID":398134,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":344831,"LibID":36,"BRefID":323981,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":null,"ShelfLocCode":"344831","RFID":null,"PaidValue":null,"Medium":"Server","Description":"Interne VLIZ documenten","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Non-open access","URL":null,"ClassifID":228,"Classification":"Non-open access","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":1,"Disclaimer":"Disclaimer_VLIZ_Intern","DutchDisclaimer":"<p>Deze publicatie is enkel beschikbaar voor persoonlijk gebruik binnen de Innovocean site <br />en mag op geen enkele manier verder worden verspreid.</p>","FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Elsevier","City":"Amsterdam"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":[{"TaxTerm":"Adamussium colbecki"},{"TaxTerm":"Bivalvia"},{"TaxTerm":"Pectinida"}],"geotermsASFA":null,"collections":[{"Collection":"VLIZ Acknowledged Publications","ShortName":"VLIZ ackn"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"941":{"SpName":"LifeWatch Species Information Backbone","SpColID":941,"ParSpColID":39,"TopParID":39,"ShortName":"LifeWatch Species Information Backbone","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone"},"39":{"SpName":"VLIZ Acknowledged Publications","SpColID":39,"ParSpColID":null,"TopParID":null,"ShortName":"VLIZ ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"VLIZ ackn"},"507":{"SpName":"World Register of Marine Species","SpColID":507,"ParSpColID":null,"TopParID":null,"ShortName":"WoRMS website","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"WoRMS website"},"915":{"SpName":"World Register of Marine Species (WoRMS) acknowledged","SpColID":915,"ParSpColID":941,"TopParID":39,"ShortName":"WoRMS ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn"},"947":{"SpName":"WoRMS ackn - direct reference","SpColID":947,"ParSpColID":915,"TopParID":39,"ShortName":"WoRMS ackn - direct","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn/WoRMS ackn - direct"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":317453,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":317453,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.1016/j.margen.2018.09.007","externalID":"10.1016/j.margen.2018.09.007","URLTypeCode":"DOI","URLID":82924,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":[{"TaxTerm":"Adamussium colbecki","AphiaID":197021,"TaxtID":24268},{"TaxTerm":"Bivalvia","AphiaID":105,"TaxtID":11417},{"TaxTerm":"Pectinida","AphiaID":387324,"TaxtID":41685}],"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":[{"TaxTerm":"Adamussium colbecki","DutchTerm":null,"AphiaID":197021,"TaxtID":24268},{"TaxTerm":"Bivalvia","DutchTerm":"Tweekleppigen","AphiaID":105,"TaxtID":11417},{"TaxTerm":"Pectinida","DutchTerm":null,"AphiaID":387324,"TaxtID":41685}],"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Bouchti, Zohra, Z.","newSesDate":{"date":"2020-05-14 07:07:21.257000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Bouchti, Zohra, Z.","updSesDate":{"date":"2020-05-14 07:07:21.257000","timezone_type":3,"timezone":"Europe/Brussels"}}}
