{"refrec":{"BRefID":324890,"RR":"<b>Puzakov, M.V.; Puzakova, L.V.; Cheresiz, S.V.</b> (2020). The <i>Tc1</i>-like elements with the spliceosomal introns in mollusk genomes. <i>Molecular Genetics and Genomics 295(3)</i>: 621-633. <a href=\"https://dx.doi.org/10.1007/s00438-020-01645-1\" target=\"_blank\">https://dx.doi.org/10.1007/s00438-020-01645-1</a>","BEntID":318367,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Molecular Genetics and Genomics 295(3)</i>: 621-633. <a href=\"https://dx.doi.org/10.1007/s00438-020-01645-1\" target=\"_blank\">https://dx.doi.org/10.1007/s00438-020-01645-1</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Puzakov, M.V.; Puzakova, L.V.; Cheresiz, S.V.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Puzakov, M.V.; Puzakova, L.V.; Cheresiz, S.V.","Englishabstract":"Transposable elements (TEs) are DNA sequences capable of transpositions within the genome and thus exerting a considerable influence on the genome functioning and structure and serving as a source of new genes. TE biodiversity studies in previously unexplored species are important for the fundamental understanding of the TE influence on eukaryotic genomes. TEs are classified into retrotransposons and DNA transposons. <i>IS630/Tc1/mariner</i> (<i>ITm</i>) superfamily of DNA transposons is one of the most diverse groups broadly represented among the eukaryotes. The study of 19 mollusk genomes revealed a new group of <i>ITm</i> superfamily elements, which we henceforth refer to as <i>TLEWI</i>. These TEs are characterized by the low copy number, the lack of terminal inverted repeats, the catalytic domain with DD36E signature and the presence of spliceosomal introns in transposase coding sequence. Their prevalence among the mollusks is limited to the class Bivalvia. Since <i>TLEWI</i> possess the features of domesticated TE and structures similar to the eukaryotic genes which are not typical for the DNA transposons, we consider the hypothesis of co-optation of <i>TLEWI</i> gene by the bivalves. The results of our study will fill the gap of knowledge about the prevalence, activity, and evolution of the <i>ITm</i> DNA transposons in multicellular genomes and will facilitate our understanding of the mechanisms of TE domestication by the host genome.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"The <i>Tc1</i>-like elements with the spliceosomal introns in mollusk genomes","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2020,"MonPub":null,"DateUpdate":"2020-06-05","DateCreate":"2020-06-05","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000544759100006","VABBcode":null,"OpenAcc":0,"DOI":"10.1007/s00438-020-01645-1"},"refs":null,"anarec":{"AnaID":324890,"PubliDate":2020,"Pagination":"621-633","XtraPublOfAnaID":null,"ISBN":null,"Volume":"295","Issue":"3","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":324889,"SerRR":"Molecular Genetics and Genomics. 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ISSN 1617-4615; e-ISSN 1617-4623","StandardTitleSer":"Molecular Genetics and Genomics","ISSN":"1617-4615","AbbrevSer":null,"StandardTitleMon":null,"StartPage":621,"Pages":13,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Puzakov","Firstname":null,"Initials":"M.V.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":318367,"AutID":418291,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Puzakova","Firstname":null,"Initials":"L.V.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":318367,"AutID":418292,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Cheresiz","Firstname":null,"Initials":"S.V.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":318367,"AutID":418293,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":345788,"LibID":36,"BRefID":324890,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":null,"ShelfLocCode":"345788","RFID":null,"PaidValue":null,"Medium":"Server","Description":"Interne VLIZ documenten","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Non-open access","URL":null,"ClassifID":228,"Classification":"Non-open access","ReqLink":1,"ClassifTypID":3,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":1,"InternalReq":1,"LoggedInReq":1,"Disclaimer":"Disclaimer_VLIZ_Intern","DutchDisclaimer":"<p>Deze publicatie is enkel beschikbaar voor persoonlijk gebruik binnen de Innovocean site <br />en mag op geen enkele manier verder worden verspreid.</p>","FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Springer-Verlag","City":"Berlin"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":[{"Collection":"VLIZ Acknowledged Publications","ShortName":"VLIZ ackn"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"941":{"SpName":"LifeWatch Species Information Backbone","SpColID":941,"ParSpColID":39,"TopParID":39,"ShortName":"LifeWatch Species Information Backbone","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone"},"39":{"SpName":"VLIZ Acknowledged Publications","SpColID":39,"ParSpColID":null,"TopParID":null,"ShortName":"VLIZ ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"VLIZ ackn"},"507":{"SpName":"World Register of Marine Species","SpColID":507,"ParSpColID":null,"TopParID":null,"ShortName":"WoRMS website","URLLocation":null,"LibID":null,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"WoRMS website"},"915":{"SpName":"World Register of Marine Species (WoRMS) acknowledged","SpColID":915,"ParSpColID":941,"TopParID":39,"ShortName":"WoRMS ackn","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":39,"SpColPath":"VLIZ ackn/LifeWatch Species Information Backbone/WoRMS ackn"},"947":{"SpName":"WoRMS ackn - 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