Document of bibliographic reference 336131

BibliographicReference record

Type
Bibliographic resource
Type of document
Journal article
BibLvlCode
AS
Title
Microbial enrichment, functional characterization and isolation from a cold seep yield piezotolerant obligate hydrocarbon degraders
Abstract
Deep-sea environments can become contaminated with petroleum hydrocarbons. The effects of hydrostatic pressure (HP) in the deep sea on microbial oil degradation are poorly understood. Here, we performed long-term enrichments (100 days) from a natural cold seep while providing optimal conditions to sustain high hydrocarbon degradation rates. Through enrichments performed at increased HP and ambient pressure (AP) and by using control enrichments with marine broth, we demonstrated that both pressure and carbon source can have a big impact on the community structure. In contrast to previous studies, hydrocarbonoclastic operational taxonomic units (OTUs) remained dominant at both AP and increased HP, suggesting piezotolerance of these OTUs over the tested pressure range. Twenty-three isolates were obtained after isolation and dereplication. After recultivation at increased HP, an Alcanivorax sp. showed promising piezotolerance in axenic culture. Furthermore, preliminary co-cultivation tests indicated synergistic growth between some isolates, which shows promise for future synthetic community construction. Overall, more insights into the effect of increased HP on oil-degrading communities were obtained as well as several interesting isolates, e.g. a piezotolerant hydrocarbonoclastic bacterium for future deep-sea bioaugmentation investigation.
WebOfScience code
https://www.webofscience.com/wos/woscc/full-record/WOS:000575458400002
Bibliographic citation
Van Landuyt, J.; Cimmino, L.; Dumolin, C.; Chatzigiannidou, I.; Taveirne, F.; Mattelin, V.; Zhang, Y.; Vandamme, P.; Scoma, A.; Williamson, A.; Boon, N. (2020). Microbial enrichment, functional characterization and isolation from a cold seep yield piezotolerant obligate hydrocarbon degraders. FEMS Microbiol. Ecol. 96(9): fiaa097. https://dx.doi.org/10.1093/femsec/fiaa097
Topic
Marine
Is peer reviewed
true

Authors

author
Name
Josefien Van Landuyt
Identifier
https://orcid.org/0000-0003-1611-1525
Affiliation
Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology
author
Name
Lorenzo Cimmino
author
Name
Charles Dumolin
Identifier
https://orcid.org/0000-0002-2691-0964
Affiliation
Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biochemie en Microbiologie; Laboratorium voor Microbiologie
author
Name
Ioanna Chatzigiannidou
Affiliation
Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology
author
Name
Felix Taveirne
Affiliation
Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology
author
Name
Valérie Mattelin
Affiliation
Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology
author
Name
Yu Zhang
author
Name
Peter Vandamme
Identifier
https://orcid.org/0000-0002-5581-7937
Affiliation
Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biochemie en Microbiologie; Laboratorium voor Microbiologie
author
Name
Alberto Scoma
Identifier
https://orcid.org/0000-0001-7981-0847
author
Name
Adam Williamson
Affiliation
Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology
author
Name
Nico Boon
Identifier
https://orcid.org/0000-0002-7734-3103
Affiliation
Ghent University; Faculty of Bioscience Engineering; Department of Biotechnology; Center for Microbial Ecology and Technology

Links

referenced creativework
type
DOI
accessURL
https://dx.doi.org/10.1093/femsec/fiaa097

taxonomic terms

taxonomic terms associated with this publication
Bacteria

Document metadata

date created
2021-04-08
date modified
2021-05-17