Document of bibliographic reference 347493

BibliographicReference record

Type
Bibliographic resource
Type of document
Journal article
BibLvlCode
AS
Title
Life beneath the ice: jellyfish and ctenophores from the Ross Sea, Antarctica, with an image-based training set for machine learning
Abstract

Background

Southern Ocean ecosystems are currently experiencing increased environmental changes and anthropogenic pressures, urging scientists to report on their biodiversity and biogeography. Two major taxonomically diverse and trophically important gelatinous zooplankton groups that have, however, stayed largely understudied until now are the cnidarian jellyfish and ctenophores. This data scarcity is predominantly due to many of these fragile, soft-bodied organisms being easily fragmented and/or destroyed with traditional net sampling methods. Progress in alternative survey methods including, for instance, optics-based methods is slowly starting to overcome these obstacles. As video annotation by human observers is both time-consuming and financially costly, machine-learning techniques should be developed for the analysis of in situ /in aqua image-based datasets. This requires taxonomically accurate training sets for correct species identification and the present paper is the first to provide such data.

New information

In this study, we twice conducted three week-long in situ optics-based surveys of jellyfish and ctenophores found under the ice in the McMurdo Sound, Antarctica. Our study constitutes the first optics-based survey of gelatinous zooplankton in the Ross Sea and the first study to use in situ / in aqua observations to describe taxonomic and some trophic and behavioural characteristics of gelatinous zooplankton from the Southern Ocean. Despite the small geographic and temporal scales of our study, we provided new undescribed morphological traits for all observed gelatinous zooplankton species (eight cnidarian and four ctenophore species). Three ctenophores and one leptomedusa likely represent undescribed species. Furthermore, along with the photography and videography, we prepared a Common Objects in Context (COCO) dataset, so that this study is the first to provide a taxonomist-ratified image training set for future machine-learning algorithm development concerning Southern Ocean gelatinous zooplankton species.

WebOfScience code
https://www.webofscience.com/wos/woscc/full-record/WOS:000685541000001
Bibliographic citation
Verhaegen, G.; Cimoli, E.; Lindsay, D. (2021). Life beneath the ice: jellyfish and ctenophores from the Ross Sea, Antarctica, with an image-based training set for machine learning. Biodiversity Data Journal 9: e69374. https://dx.doi.org/10.3897/bdj.9.e69374
Topic
Marine
Is peer reviewed
true
Access rights
open access
Is accessible for free
true

Authors

author
Name
Gerlien Verhaegen
author
Name
Emiliano Cimoli
author
Name
Dhugal Lindsay

Links

referenced creativework
type
DOI
accessURL
https://dx.doi.org/10.3897/bdj.9.e69374

taxonomic terms

taxonomic terms associated with this publication
Ctenophora [Sea gooseberries]
Siphonophora

geographic terms

geographic terms associated with this publication
PS, Southern Ocean

Document metadata

date created
2021-11-23
date modified
2021-11-29