{"refrec":{"BRefID":353252,"RR":"<b>Bateman, K.S.; Kerr, R.; Stentiford, G.D.; Bean, T.P.; Hooper, C.; van Eynde, B.; Delbare, D.; Bojko, J.; Christiaens, O.; Taning, C.N.T.; Smagghe, G.; van Oers, M.M.; van Aerle, R.</b> (2021). Identification and full characterisation of two novel crustacean infecting members of the family <i>Nudiviridae</i> provides support for two subfamilies. <i>Viruses 13(9)</i>: 1694. <a href=\"https://dx.doi.org/10.3390/v13091694\" target=\"_blank\">https://dx.doi.org/10.3390/v13091694</a>","BEntID":350961,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":1,"RefStringPartII":". <i>Viruses 13(9)</i>: 1694. <a href=\"https://dx.doi.org/10.3390/v13091694\" target=\"_blank\">https://dx.doi.org/10.3390/v13091694</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Bateman, K.S.; Kerr, R.; Stentiford, G.D.; Bean, T.P.; Hooper, C.; van Eynde, B.; Delbare, D.; Bojko, J.; Christiaens, O.; Taning, C.N.T.; Smagghe, G.; van Oers, M.M.; van Aerle, R.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Bateman, K.S. <i>et al.</i>","Englishabstract":"Multiple enveloped viruses with rod-shaped nucleocapsids have been described, infecting the epithelial cell nuclei within the hepatopancreas tubules of crustaceans. These bacilliform viruses share the ultrastructural characteristics of nudiviruses, a specific clade of viruses infecting arthropods. Using histology, electron microscopy and high throughput sequencing, we characterise two further bacilliform viruses from aquatic hosts, the brown shrimp (<i>Crangon crangon</i>) and the European shore crab (<i>Carcinus maenas</i>). We assembled the full double stranded, circular DNA genome sequences of these viruses (~113 and 132 kbp, respectively). Comparative genomics and phylogenetic analyses confirm that both belong within the family <i>Nudiviridae</i> but in separate clades representing nudiviruses found in freshwater and marine environments. We show that the three thymidine kinase (<i>tk</i>) genes present in all sequenced nudivirus genomes, thus far, were absent in the <i>Crangon crangon</i> nudivirus, suggesting there are twenty-eight core genes shared by all nudiviruses. Furthermore, the phylogenetic data no longer support the subdivision of the family <i>Nudiviridae</i> into four genera (<i>Alphanudivirus</i> to <i>Deltanudivirus</i>), as recently adopted by the International Committee on Taxonomy of Viruses (ICTV), but rather shows two main branches of the family that are further subdivided. Our data support a recent proposal to create two subfamilies within the family <i>Nudiviridae</i>, each subdivided into several genera. 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