{"refrec":{"BRefID":368150,"RR":"<b>Patil, M.P.; Kim, J.-O.; Yoo, S.H.; Seo, Y.B.; Lee, Y.-J.; Kim, J.-K.; Kitamura, S.-I.; Kim, G.-D.</b> (2023). Complete mitogenome and phylogenetic analysis of a marine ray-finned fish, <i>Alcichthys elongatus</i> (Perciformes: Cottidae). <i>Fishes 8(10)</i>: 513. <a href=\"https://dx.doi.org/10.3390/fishes8100513\" target=\"_blank\">https://dx.doi.org/10.3390/fishes8100513</a>","BEntID":365876,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Fishes 8(10)</i>: 513. <a href=\"https://dx.doi.org/10.3390/fishes8100513\" target=\"_blank\">https://dx.doi.org/10.3390/fishes8100513</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Patil, M.P.; Kim, J.-O.; Yoo, S.H.; Seo, Y.B.; Lee, Y.-J.; Kim, J.-K.; Kitamura, S.-I.; Kim, G.-D.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Patil, M.P. <i>et al.</i>","Englishabstract":"<i>Alcichthys elongatus</i> is the only species in the genus, and this work is the first to provide a comprehensive mitogenome analysis of this species. The <i>A. elongatus</i> mitogenome was 16,712 bp long, with biased A + T content (52.33%), and featured thirteen protein-coding genes (PCGs), twenty-two tRNAs, two rRNAs, and the control region (D-loop). The H strand encoded twenty-eight genes (twelve PCGs, fourteen tRNA, and two rRNA) and the control region, whereas the L strand encoded the remaining nine genes (<i>ND6</i> and eight tRNA). Except for <i>COXI</i>, which started with GTG, all PCG sequences started with ATG and ended with TAA (<i>ND4L</i>, <i>ND5</i>, <i>COXI</i>, <i>ATP8</i>) or TAG (<i>ND1</i>, <i>ND6</i>) termination codons, with some (<i>ND2</i>, <i>ND3</i>, <i>ND4</i>, <i>COXII</i>, <i>COXIII</i>, <i>ATP6</i>, <i>Cytb</i>) having an incomplete termination codon. Except for tRNA-serine-1 (<i>trnS</i>), the majority of the tRNAs exhibited characteristic cloverleaf secondary structures. Based on 13 PCGs, phylogenetic analysis placed <i>A. elongatus</i> in the same clade as <i>Icelus spatula</i>. This genomic data will be useful for species identification, phylogenetic analysis, and population genetics.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Complete mitogenome and phylogenetic analysis of a marine ray-finned fish, <i>Alcichthys elongatus</i> (Perciformes: Cottidae)","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"Alcichthys elongatus; Perciformes; Cottidae; mitochondrial genome; phylogenetic analysis; ray-finned fish; marine sculpin","OtherDescriptors":null,"Notes":null,"AnaPub":2023,"MonPub":null,"DateUpdate":"2023-10-16","DateCreate":"2023-10-16","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:001097988400001","VABBcode":null,"OpenAcc":1,"DOI":"10.3390/fishes8100513"},"refs":null,"anarec":{"AnaID":368150,"PubliDate":2023,"Pagination":"513","XtraPublOfAnaID":null,"ISBN":null,"Volume":"8","Issue":"10","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":347497,"SerRR":"Fishes. 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