{"refrec":{"BRefID":382817,"RR":"<b>Meyer, R.; Appeltans, W.; Duncan, W.D.; Dimitrova, M.; Gan, Y.M.; Jeppesen, T.S.; Mungall, C.; Paul, D.L.; Provoost, P.; Robertson, T.; Schriml, L.; Suominen, S.; Walls, R.; Sweetlove, M.; Ung, V.; Van de Putte, A.; Wallis, E.; Wieczorek, J.; Buttigieg, P.L.</b> (2023). Aligning standards communities for Omics Biodiversity Data: sustainable Darwin Core-MIxS interoperability. <i>Biodiversity Data Journal 11</i>: e112420. <a href=\"https://dx.doi.org/10.3897/BDJ.11.e112420\" target=\"_blank\">https://dx.doi.org/10.3897/BDJ.11.e112420</a>","BEntID":380559,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Biodiversity Data Journal 11</i>: e112420. <a href=\"https://dx.doi.org/10.3897/BDJ.11.e112420\" target=\"_blank\">https://dx.doi.org/10.3897/BDJ.11.e112420</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Meyer, R.; Appeltans, W.; Duncan, W.D.; Dimitrova, M.; Gan, Y.M.; Jeppesen, T.S.; Mungall, C.; Paul, D.L.; Provoost, P.; Robertson, T.; Schriml, L.; Suominen, S.; Walls, R.; Sweetlove, M.; Ung, V.; Van de Putte, A.; Wallis, E.; Wieczorek, J.; Buttigieg, P.L.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Meyer, R. <i>et al.</i>","Englishabstract":"<p style=\"text-align:justify;\">The standardization of data, encompassing both primary and contextual information (metadata), plays a pivotal role in facilitating data (re-)use, integration, and knowledge generation. However, the biodiversity and omics communities, converging on omics biodiversity data, have historically developed and adopted their own distinct standards, hindering effective (meta)data integration and collaboration.<p style=\"text-align:justify;\">In response to this challenge, the Task Group (TG) for Sustainable DwC-MIxS Interoperability was established. Convening experts from the Biodiversity Information Standards (TDWG) and the Genomic Standards Consortium (GSC) alongside external stakeholders, the TG aimed to promote sustainable interoperability between the Minimum Information about any (x) Sequence (MIxS) and Darwin Core (DwC) specifications.<p style=\"text-align:justify;\">To achieve this goal, the TG utilized the Simple Standard for Sharing Ontology Mappings (SSSOM) to create a comprehensive mapping of DwC keys to MIxS keys. This mapping, combined with the development of the MIxS-DwC extension, enables the incorporation of MIxS core terms into DwC-compliant metadata records, facilitating seamless data exchange between MIxS and DwC user communities.<p style=\"text-align:justify;\">Through the implementation of this translation layer, data produced in either MIxS- or DwC-compliant formats can now be efficiently brokered, breaking down silos and fostering closer collaboration between the biodiversity and omics communities. To ensure its sustainability and lasting impact, TDWG and GSC have both signed a Memorandum of Understanding (MoU) on creating a continuous model to synchronize their standards. These achievements mark a significant step forward in enhancing data sharing and utilization across domains, thereby unlocking new opportunities for scientific discovery and advancement.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Aligning standards communities for Omics Biodiversity Data: sustainable Darwin Core-MIxS interoperability","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:01.897972","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":"microbiome; eDNA; biodiversity; information standards; omics; metadata; harmonization; FAIR; MIxS; Darwin Core","OtherDescriptors":null,"Notes":null,"AnaPub":2023,"MonPub":null,"DateUpdate":"2024-02-19","DateCreate":"2024-02-16","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:001098579900002","VABBcode":null,"OpenAcc":1,"DOI":"10.3897/BDJ.11.e112420"},"refs":null,"anarec":{"AnaID":382817,"PubliDate":2023,"Pagination":"e112420","XtraPublOfAnaID":null,"ISBN":null,"Volume":"11","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":250111,"SerRR":"Biodiversity Data Journal. Pensoft Publishers: Sofia.  ISSN 1314-2836; e-ISSN 1314-2828","StandardTitleSer":"Biodiversity Data Journal","ISSN":"1314-2836","AbbrevSer":null,"StandardTitleMon":null,"StartPage":25,"Pages":null,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Meyer","Firstname":"Raissa","Initials":"R.","Affiliation":"Helmholtz Ctr Polar & Marine Res, Alfred Wegener Inst, Bremerhaven, Germany.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554647,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Appeltans","Firstname":"Ward","Initials":"W.","Affiliation":"Intergovernmental Oceanographic Commission of UNESCO, Ocean Biodiversity Information System","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":478207,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"IODE","InsFSN":"UNESCO; UNESCO/IOC Project Office for IODE","ORCID":null,"PersID":2856,"InsID":5725},{"AutName":"Duncan","Firstname":"William","Initials":"W.D.","Affiliation":"Univ Florida, Gainesville, FL USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554651,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Dimitrova","Firstname":"Mariya","Initials":"M.","Affiliation":"Bulgarian Acad Sci, Sofia, Bulgaria.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554652,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Gan","Firstname":"Yi-Ming","Initials":"Y.M.","Affiliation":"Royal Belgian Institute of Natural Sciences","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554424,"OrderNr":5,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"IRScNB/KBIN","InsFSN":"Koninklijk Belgisch Instituut voor Natuurwetenschappen","ORCID":"0000-0001-7087-2646","PersID":36630,"InsID":1883},{"AutName":"Jeppesen","Firstname":"Thomas Stjernegaard","Initials":"T.S.","Affiliation":"Lawrence Berkeley Natl Lab, NERSC, Berkeley, CA USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554655,"OrderNr":6,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Mungall","Firstname":"Christopher","Initials":"C.","Affiliation":"Univ Illinois, Illinois Nat Hist Survey, Species File Grp, Champaign, IL USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554656,"OrderNr":7,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Paul","Firstname":"Deborah","Initials":"D.L.","Affiliation":"Univ Maryland, Sch Med, Dept Epidemiol & Publ Hlth, Baltimore, MD USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554657,"OrderNr":8,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Provoost","Firstname":"Pieter","Initials":"P.","Affiliation":"Intergovernmental Oceanographic Commission of UNESCO, Ocean Biodiversity Information System","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":478208,"OrderNr":9,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"IODE","InsFSN":"UNESCO; UNESCO/IOC Project Office for IODE","ORCID":null,"PersID":9375,"InsID":5725},{"AutName":"Robertson","Firstname":"Tim","Initials":"T.","Affiliation":"Lawrence Berkeley Natl Lab, NERSC, Berkeley, CA USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554659,"OrderNr":10,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Schriml","Firstname":"Lynn","Initials":"L.","Affiliation":"Crit Path Inst, Tucson, AZ USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554660,"OrderNr":11,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Suominen","Firstname":"Saara","Initials":"S.","Affiliation":"Intergovernmental Oceanographic Commission of UNESCO, Ocean Biodiversity Information System","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":556441,"OrderNr":12,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"IOC","InsFSN":"UNESCO; Intergovernmental Oceanographic Commission","ORCID":"0000-0001-9401-8460","PersID":39797,"InsID":704},{"AutName":"Walls","Firstname":"Ramona","Initials":"R.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":400691,"OrderNr":13,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Sweetlove","Firstname":"Maxime","Initials":"M.","Affiliation":"Royal Belgian Institute of Natural Sciences","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":383053,"OrderNr":14,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"OD Natuur","InsFSN":"Koninklijk Belgisch Instituut voor Natuurwetenschappen; Operationele Directie Natuurlijk Milieu","ORCID":null,"PersID":24968,"InsID":13002},{"AutName":"Ung","Firstname":"Visotheary","Initials":"V.","Affiliation":"UMR 7205 CNRS MNHN SU EPHE UA, Paris, France.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554663,"OrderNr":15,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Van de Putte","Firstname":"Anton","Initials":"A.","Affiliation":"Royal Belgian Institute of Natural Sciences","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":164873,"OrderNr":16,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":"IRScNB/KBIN","InsFSN":"Koninklijk Belgisch Instituut voor Natuurwetenschappen","ORCID":"0000-0003-1336-5554","PersID":5287,"InsID":1883},{"AutName":"Wallis","Firstname":"Elycia","Initials":"E.","Affiliation":"CSIRO, Atlas Living Australia, Melbourne, Australia.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554665,"OrderNr":17,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Wieczorek","Firstname":"John","Initials":"J.","Affiliation":"Univ Calif Berkeley, Berkeley, CA USA.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554666,"OrderNr":18,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Buttigieg","Firstname":"Pier Luigi","Initials":"P.L.","Affiliation":"GEOMAR Helmholtz Ctr Ocean Res, Helmholtz Metadata Collaborat, Kiel, Germany.","Discriminator":null,"CorporateFlag":0,"BEntID":380559,"AutID":554667,"OrderNr":19,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":396388,"LibID":36,"BRefID":382817,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"396388","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Pensoft Publishers","City":"Sofia"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":[{"Collection":"OMA - Open Marien Archief","ShortName":"OMA"}],"conf":null,"proj":null,"Physdatasets":null,"spcols":{"222":{"SpName":"BMB - Belgische Mariene Bibliografie","SpColID":222,"ParSpColID":null,"TopParID":null,"ShortName":"BMB","URLLocation":null,"LibID":36,"OpenRepoFlag":null,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"BMB"},"221":{"SpName":"OMA - Open Marien Archief","SpColID":221,"ParSpColID":null,"TopParID":null,"ShortName":"OMA","URLLocation":null,"LibID":36,"OpenRepoFlag":1,"SpTypID":null,"TopParIDNotWebsite":null,"SpColPath":"OMA"}},"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":380559,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"},{"BEntID":380559,"AbstractFlag":1,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":[{"URL":"https://dx.doi.org/10.3897/BDJ.11.e112420","externalID":"10.3897/BDJ.11.e112420","URLTypeCode":"DOI","URLID":128127,"URLTypID":13,"URLType":"DOI","URLPrefix":"http://dx.doi.org/"}],"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Lyssens, Liesbeth, L.","newSesDate":{"date":"2024-02-16 13:07:21.230000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Bouchti, Zohra, Z.","updSesDate":{"date":"2024-02-19 06:58:21.840000","timezone_type":3,"timezone":"Europe/Brussels"}}}