{"refrec":{"BRefID":391124,"RR":"<b>Puzakov, M.V.; Puzakova, L.V.</b> (2024). Structure and evolution of DNA transposons of the L31 superfamily in bivalves. <i>Molecular Biology 58(1)</i>: 43-61. <a href=\"https://dx.doi.org/10.1134/s0026893324010114\" target=\"_blank\">https://dx.doi.org/10.1134/s0026893324010114</a>","BEntID":388871,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":0,"RefStringPartII":". <i>Molecular Biology 58(1)</i>: 43-61. <a href=\"https://dx.doi.org/10.1134/s0026893324010114\" target=\"_blank\">https://dx.doi.org/10.1134/s0026893324010114</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Puzakov, M.V.; Puzakova, L.V.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Puzakov, M.V.; Puzakova, L.V.","Englishabstract":"The mobile genetic elements <i>IS630/Tc1/mariner (ITm</i>) are widespread DNA transposons that make a significant contribution to the evolution of eukaryotic genomes. With the start of large-scale application of next-generation sequencing (NGS) technologies and the emergence of many new whole genome sequences of organisms in nucleotide sequence collections, the <i>ITm</i> elements have been identified in most taxa of the eukaryotic tree of life. Although <i>ITm</i> diversity has been studied in detail, new elements are still found, thus expanding the respective DNA transposon group and calling for review of its classification. Bivalve <i>L31</i> elements were for the first time analyzed in detail to describe their structures, diversity, distribution, and phylogenetic position among the <i>ITm</i> elements. The <i>L31</i> transposons were found to form an independent superfamily of an ancient origin within the <i>ITm</i> group. Rather high diversity was observed within the <i>L31</i> clade; i.e., five phylogenetic clusters were identified. In mollusks, the <i>L31</i> transposons have been detected only in the subclass Autobranchia and predominate in diversity and number in the infraclass Pteriomorphia. A protein encoded by open reading frame 2 (ORF2) was shown to be an integral structural component of almost all full-length <i>L31</i> elements. The results provide for a better understanding of the evolution of particular <i>ITm</i> transposons. Further study of the <i>L31</i> transposons in other taxa (cnidarians) and functional investigation of the ORF2 protein product will help to better understand the evolution of DNA transposons, the mechanisms of their horizontal transfer, and their contribution to eukaryotic biodiversity.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Structure and evolution of DNA transposons of the L31 superfamily in bivalves","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2024,"MonPub":null,"DateUpdate":"2024-03-18","DateCreate":"2024-03-18","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":null,"VABBcode":null,"OpenAcc":0,"DOI":"10.1134/s0026893324010114"},"refs":null,"anarec":{"AnaID":391124,"PubliDate":2024,"Pagination":"43-61","XtraPublOfAnaID":null,"ISBN":null,"Volume":"58","Issue":"1","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":377555,"SerRR":"Molecular Biology. 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