{"refrec":{"BRefID":40686,"RR":"<b>Shimomura, K.; Yamamoto, S.; Harayama, S.; Saga, N.</b> (2002). Type II DNA topoisomerase (Top2) as promising molecular marker for phylogenetic analysis in Rhodophyta. <i>Bot. Mar. 45</i>: 87-90","BEntID":40686,"PublicFlag":1,"CheckedFlag":0,"wosflag":1,"vabbflag":null,"RefStringPartII":". <i>Bot. Mar. 45</i>: 87-90","DocTypID":8,"DocType":"Journal article","MarineFlag":1,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Shimomura, K.; Yamamoto, S.; Harayama, S.; Saga, N.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Shimomura, K. <i>et al.</i>","Englishabstract":"Taxonomic uncertainty still exists in the Rhodophyta, and more suitable molecular markers for their phylogeny are required to establish conclusively their taxonomic relationship. In this paper, we describe sequencing, characterisation of partial nucleotide sequence of the <i>TOP2</i> and phylogenetic analysis of the Top2, which is translated from the <i>TOP2</i> in <i>Porphyra yezoensis</i>. The length of the partial nucleotide sequence of <i>TOP2</i> was 1,208 bp and the predicted amino acid sequence was 402 amino acids. The present sequences matched to known <i>TOP2</i> or Top2 sequences in the public databases and consensus sequences for the motifs [Top2 signature, ATP/GTP- binding site motif A (P-loop), etc.] are indicated in the amino acid sequences. In our phylogenetic trees, the Rhodophyta occupied an independent position within the crown eukaryotes. Thus, we can advocate that we succeeded in the determination of <i>TOP2</i> and Top2 sequences of <i>P. yezoensis</i>and Top2 may be a promising marker for phylogenetic analysis of the Rhodophyta. This is the first report to deal with Top2 from the Rhodophyta.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Type II DNA topoisomerase (Top2) as promising molecular marker for phylogenetic analysis in Rhodophyta","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2024-12-10 01:33:17.368041","timezone_type":1,"timezone":"+01:00"},"UserAccessRight":null,"UserAccID":null,"AuthorKeywords":null,"OtherDescriptors":null,"Notes":null,"AnaPub":2002,"MonPub":null,"DateUpdate":"2004-01-30","DateCreate":"2003-10-10","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:000174253200011","VABBcode":null,"OpenAcc":1},"refs":null,"anarec":{"AnaID":40686,"PubliDate":2002,"Pagination":"87-90","XtraPublOfAnaID":null,"ISBN":null,"Volume":"45","Issue":null,"BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":42293,"SerRR":"Botanica Marina. Walter de Gruyter & Co: Berlin; New York.  ISSN 0006-8055; e-ISSN 1437-4323","StandardTitleSer":"Botanica Marina","ISSN":"0006-8055","AbbrevSer":"Bot. Mar.","StandardTitleMon":null,"StartPage":87,"Pages":4,"ToPubliDate":null,"BRefBibLvlCode":"S","SerNotes":null},"monrec":null,"serrec":null,"relations":null,"relationsRev":null,"addrec":null,"othpubs":null,"ownerships":null,"authors":[{"AutName":"Shimomura","Firstname":"Kengo","Initials":"K.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":40686,"AutID":5066,"OrderNr":1,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Yamamoto","Firstname":"Shoichiro","Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":40686,"AutID":1812,"OrderNr":2,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Harayama","Firstname":null,"Initials":"S.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":40686,"AutID":40740,"OrderNr":3,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null},{"AutName":"Saga","Firstname":"Naotsune","Initials":"N.","Affiliation":null,"Discriminator":null,"CorporateFlag":0,"BEntID":40686,"AutID":5051,"OrderNr":4,"DegrID":null,"EditorFlag":0,"CorrespFlag":0,"IllustratorFlag":0,"ReviserFlag":0,"TranslatorFlag":0,"InsAcronym":null,"InsFSN":null,"ORCID":null,"PersID":null,"InsID":null}],"mapdetails":null,"datasets":null,"monographs":null,"monparts":null,"serparts":null,"BEntOpen":null,"BEntPrivate":null,"availability":[{"BInstID":40686,"LibID":36,"BRefID":40686,"EmbargoDate":null,"FullEmbargoDate":null,"PhysMedID":16,"hasOCRd":1,"ShelfLocCode":"40686","RFID":null,"PaidValue":null,"Medium":"Server","Description":"VLIZ Open Access","Acronym":"VLIZ","Library":"Vlaams Instituut voor de Zee","DutchTerm":"Open access","URL":null,"ClassifID":53,"Classification":"Open access","ReqLink":null,"ClassifTypID":1,"URLLocation":"https://www.vliz.be/imisdocs/publications/","SubDir":null,"InternalReq":0,"LoggedInReq":0,"Disclaimer":null,"DutchDisclaimer":null,"FileFormat":".pdf","FileDescr":"pdf","InsPub":1,"InsID":36,"FileFormID":6,"LendableFlag":1,"PublicFlag":1,"orderLib":"A","Notes":null,"AccConID":null,"AccessConstraint":null,"LicURL":null}],"litstyles":null,"thespers":null,"arch2discl":null,"SERpubls":[{"PublName":"Walter de Gruyter & Co","City":"Berlin; New York"}],"MONpubls":null,"pictures":[],"thestermsPath":null,"thestermsASFA":null,"taxtermsASFA":null,"geotermsASFA":null,"collections":null,"conf":null,"proj":null,"Physdatasets":null,"spcols":null,"doi":null,"publs":null,"serparttypes":null,"monauthors":null,"MParts":null,"SParts":null,"hLibs":null,"langs":[{"BEntID":40686,"AbstractFlag":0,"LangID":15,"LangCode":"en","Lang":"English","DutchTerm":"Engels","LangCodeExtended":"eng"}],"urls":null,"thesterms":null,"taxterms":null,"geoterms":null,"othterms":null,"asfacodes":null,"asfa2codes":null,"thestermsFRIS":null,"taxtermsFRIS":null,"geotermsFRIS":null,"othtermsFRIS":null,"resmessage":"","complete":1,"sessions":{"newSesName":"Milh, Dominique, D.","newSesDate":{"date":"2003-10-10 10:09:02.033000","timezone_type":3,"timezone":"Europe/Brussels"},"updSesName":"Haspeslagh, Jan, J.","updSesDate":{"date":"2004-01-30 12:04:11.047000","timezone_type":3,"timezone":"Europe/Brussels"}}}