{"refrec":{"BRefID":449354,"RR":"<b>Grouzdev, D.; Pales Espinosa, E.P.; Tettelbach, S.; Farhat, S.; Tanguy, A.; Boutet, I.; Guiglielmoni, N.; Flot, J.; Tobi, H.; Allam, B.</b> (2024). Chromosome-level genome assembly of the bay scallop <i>Argopecten irradians</i>. <i>Scientific Data 11(1)</i>: 1057. <a href=\"https://dx.doi.org/10.1038/s41597-024-03904-x\" target=\"_blank\">https://dx.doi.org/10.1038/s41597-024-03904-x</a>","BEntID":447192,"PublicFlag":1,"CheckedFlag":1,"wosflag":1,"vabbflag":null,"RefStringPartII":". <i>Scientific Data 11(1)</i>: 1057. <a href=\"https://dx.doi.org/10.1038/s41597-024-03904-x\" target=\"_blank\">https://dx.doi.org/10.1038/s41597-024-03904-x</a>","DocTypID":8,"DocType":"Journal article","MarineFlag":0,"FreshFlag":0,"BrackishFlag":0,"TerrestrialFlag":0,"Authorstring":"Grouzdev, D.; Pales Espinosa, E.P.; Tettelbach, S.; Farhat, S.; Tanguy, A.; Boutet, I.; Guiglielmoni, N.; Flot, J.; Tobi, H.; Allam, B.","OrigTitleTranslFlag":0,"Authorstringtrunc":"Grouzdev, D. <i>et al.</i>","Englishabstract":"The bay scallop, Argopecten irradians, is a species of major commercial, cultural, and ecological importance. It is endemic to the eastern coast of the United States, but has also been introduced to China, where it supports a significant aquaculture industry. Here, we provide an annotated chromosome-level reference genome assembly for the bay scallop, assembled using PacBio and Hi-C data. The total genome size is 845.9 Mb, distributed over 1,503 scaffolds with a scaffold N50 of 44.3 Mb. The majority (92.9%) of the assembled genome is contained within the 16 largest scaffolds, corresponding to the 16 chromosomes confirmed by Hi-C analysis. The assembly also includes the complete mitochondrial genome. Approximately 36.2% of the genome consists of repetitive elements. The BUSCO analysis showed a completeness of 96.2%. We identified 33,772 protein-coding genes. This genome assembly will be a valuable resource for future research on evolutionary dynamics, adaptive mechanisms, and will support genome-assisted breeding, contributing to the conservation and management of this iconic species in the face of environmental and pathogenic challenges.","AbstractOtherLang":null,"BibLvlCode":"AS","StandardTitle":"Chromosome-level genome assembly of the bay scallop <i>Argopecten irradians</i>","OrigTitleLangCode":"en","OrigTitleLangCodeExtended":"eng","OrigTitleLangID":15,"DateLastModified":{"date":"2026-10-05 01:50:03.718606","timezone_type":1,"timezone":"+02:00"},"AuthorKeywords":"read alignment;lamarck;population;adaptation;annotation;selection;genetics;program","OtherDescriptors":null,"Notes":null,"AnaPub":2024,"MonPub":null,"DateUpdate":"2026-09-28","DateCreate":"2026-09-28","SecASFANote":null,"ConfID":null,"PeerRev":1,"VlizCoreFlag":1,"WoScode":"WOS:001324838900004","VABBcode":null,"OpenAcc":0,"DOI":"10.1038/s41597-024-03904-x"},"refs":null,"anarec":{"AnaID":449354,"PubliDate":2024,"Pagination":"1057","XtraPublOfAnaID":null,"ISBN":null,"Volume":"11","Issue":"1","BRefMon":null,"BRefMonRR":null,"BRefXtra":null,"BRefXtraRR":null,"SerBRefID":254705,"SerRR":"Scientific Data. 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