IMIS | MarineInfo

MSc Perez Perez, Ruben
ORCID

Institute
Expertise
Previous institutes (6)
Publications (17)
Projects (6)
Datasets (46)

Thesaurus terms: Biodiversity informatics; Marine ecology

Spanish Council for Scientific Research (CSIC), more

Direct contact at institute:
E-mail:

Vlaams Instituut voor de Zee (VLIZ), more

Function: Science Officer Data Centre
Period: From 25th Mar 2019 till 31st Aug 2025

University of Jaén; Faculty of Experimental Sciences; Department of Animal Biology, Vegetal Biology and Ecology, more
University of Porto; Faculty of Sciences; Department of Zoology and Antropology; Research Center in Biodiversity and Genetic Resources (CIBIO), more
Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biologie; Afdeling Mariene Biologie; Erasmus Mundus MSC in Marine Biodiversity and Conservation (EMBC+), more
Atlantic Technological University (ATU), more
University of Algarve; Faculty of Marine and Environmental Sciences; Centre of Marine Sciences (CCMAR), more

EMODnet China - EMODnet PArtnership for China and Europe, more
European Marine Observation and Data Network- Biology III, more
European Marine Observation and Data Network- Biology IV, more
European Marine Observation and Data Network- Biology V, more
European Ocean Biodiversity Information System, more
The Rich North Sea, more

Data [show]
Aleffi, I. F., 2004: LBMRev dataset. Marine Biology Laboratory, University of Trieste, Italy, more Alfred Wegener Institut für Polar- und Meeresforschung; Senckenbergische Naturforschende Gesellschaft. - Germany (2015). Macrozoobenthos data from the southeastern North Sea in 2000., more Bachelet, G., 2004: Benthos Gironde Estuary. Université Bordeaux 1, Station Marine d'Arcachon, Laboratoire d'Océanographie Biologique, France, more CEFAS. - UK (2015). Macrobenthos from English waters between 2000-2002., more Cochrane, S. (2001). Macrobenthos from the Norwegian waters. Akvaplan-niva, Norway., more NSBS: Craeymeersh J., P. Kingston, E. Rachor, G. Duineveld, Carlo Heip, Edward Vanden Berghe, 1986: North Sea Benthos Survey., more Dewarumez J.-M. & Desroy N. - 2000. Eastern Channel dataset. Station Marine de Wimereux, France., more Dewarumez, J.-M., Dauvin, J.-C. & Desroy, N - 2000. Macrobenthos from Copale - Authie. Station Biologie de Wimereux, France., more EurOBIS: EurOBIS data. European node of the Ocean Biodiversity Information System (EurOBIS). Available online at www.eurobis.org. Consulted on yyyy-mm-dd., more Fisheries Research Service, Marine Laboratory (2015). Macrobenthos samples collected in the Scottish waters in 2001., more Giachini Tosetto Everton, Neumann-Leitão Sigrid, Araujo Moacyr, Minto Dimoune Djoirka, Bertrand Arnaud, Nogueira Junior Miodeli (2012). Abundance data of planktonic cnidarians collected during the Camadas Finas III survey performed along the North Brazilian continental shelf and open ocean. SEANOE. https://doi.org/10.17882/93375, more Gonzélez Duarte, M. M.; Bethencourt Núñez, M.; (2019): Arqueomonitor project: Abundance of the Bucentaure and Fougueux shipwrecks benthic communities, Cadiz Bay (Spain) 2012-2013, more Grémare, A., J.M. Amouroux, , C. Labrune, 1998: Redit dataset. Observatoire Océanologique de Banyuls-Sur-Mer; Laboratoire d'Océanographie Biologique, France, more Herrmann, M., J. Laudien, 2004: Soft bottom community structure and diversity in Arctic Kongsfjorden. Alfred-Wegener-Institute for Polar and Marine Research, Bremerhaven, Germany, more Hillewaert, H. (2000). Macrozoobenthos from the Belgian Continental Shelf, collected in 2000. Vlaamse Overheid; Beleidsdomein Landbouw en Visserij; Instituut voor Landbouw- en Visserijonderzoek; Kenniseenheid: Dier; Onderzoeksdomein Visserij, Belgium., more Kendall M., 1996: Arctic soft-sediment macrobenthos. Plymouth Marine Laboratory, UK, more Kendall, M., S. Widdicombe, 1999: Plymouth sound dataset. Soft sediment macrobenthos from the Plymouth Sound from 1995. Plymouth Marine Laboratory, UK, more Koninklijk Nederlands Instituut voor Zeeonderzoek (Texel), National Institute for Coastal and Marine Management (Ministery of Transport and Public Works) - 2001. Macrobenthos in the Dutch Sector of the North Sea 2000-2001., more Kotwicki L., 1996: Bay of Puck dataset. Polish Academy of Sciences, Institute of Oceanology, Department of Marine Ecology, Poland, more Leibniz-Institut für Meereswissenschaften an der Universität Kiel - Germany (2015). Amrum Bank and inner German Bight Benthos, more Lemos Valéria Marques, Vieira João Paes (2020). Abundance of young mullet Mugil liza Valenciennes, 1836 in the surf zone along the southern coast of Brazil. SEANOE., more Mackie, A.S.Y., P.G. Oliver, E.I.S. Rees, 1991: Biomôr 1 dataset. Benthic data from the Southern Irish Sea from 1989-1991. National Museum and galleries of Wales, Cardiff, UK., more Marine Ecological Surveys Ltd. - UK (2009). Macrobenthos from the eastern English Channel in 1999 and 2001., more Nehring, S., 1999. BfG-Monitoring in the German North Sea estuaries: Macrozoobenthos. Federal Institute of Hydrology., more Nevrova H., Petrov A. & Revkov N., 1996: Laspibay-Black Sea dataset IBSS, Sevastopol. Institute of Biology of the Southern Seas (IBSS), Ukraine, more Occhipinti-Ambrogi A., 2002: Cesenatico dataset. Department of Ecologia del Territorio , University of Pavia, Italy, more Olli, Kalle; Klais, Riina; Tamminen, Timo (2016), Data from: Rehabilitating the cyanobacteria – niche partitioning, resource use efficiency, and phytoplankton community structure during diazotrophic cyanobacterial blooms, Dryad, Dataset,, more Olu K, Cannat M, Arnaud-Haond S, Rabouille C, Lallier F, Blandin J, Cambon-Bonavita M, Justiniano J, Sarradin P, Fouquet Y, Fabri M, Gillet H, Soubigou O, Menot L, Cotten C (2025). Biological samples from the french oceanographic fleet's deep-sea cruises. Version 1.3. IFREMER - French Research Institute for Exploitation of the Sea. Samplingevent dataset. 10.15468/dl.ey5ub5, more Orlando-Bonaca, M.; National Institute of Biology - Marine Biology Station; (2019): Cymodocea nodosa in the slovenian coastal area, more Oug, E. & B. Rygg (2000). Macrobenthos data from the Norwegian Skagerrak coast. Norwegian Institute for Water Research (NIVA) and Norwegian Pollution Control Authority., more Petrov A. & N. Revkov, 1986: MegFeod-Black Sea dataset IBSS, Sevastopol. Institute of Biology of the Southern Seas (IBSS), Ukraine, more Petrov A. & N. Revkov, 1993: Strelbay-Black Sea” dataset – IBSS, Sevastopol. Institute of Biology of the Southern Seas (IBSS), Ukraine, more Petrov A. & Revkov N., 1986: Jalta-Black Sea dataset – IBSS, Sevastopol. Institute of Biology of the Southern Seas (IBSS), Ukraine, more Rijkswaterstaat (2024) Bird observations at Borsele off shore wind farm, more Rumohr, H., 1995: Kiel Bay intercalibration data set. Leibniz Institute of Marine Sciences, Marine Ecology Division, Germany, more VLIZ & ILVO (2022). Belgian recreational fisheries monitoring, more Van Dalfsen, J. (2000). Macrobenthos data from the Doggerbank - 2000. Institute for Marine Resources and Ecosystem Studies; Vestiging Den Helder, The Netherlands., more Vatova A., 1936: Fauna Bentonica dataset; Instituto di Biologia Marine per l’Adriatico, Venezia, Italy, more Weslawski J.-M., E. Malec, R. Jaskula, M. Wlodarska-Kowalczuk, M. Kedra, 2002: Polish Arctic Marine Programme. Macrobenthic data from Hornsund from 2002. Polish Academy of Sciences, Institute of Oceanology, Poland, more Whomersley, P., 2003: National Marine Monitoring Programme. Benthos data of the North Sea, Irish Sea, English Channel from 2002-2003. CEFAS, Burnham On Crouch, UK, more Zenetos A., 1987: Aegean Sea coastal benthic communities, Geras gulf (Mytilini), Chemical pollution (tannery effluents). Hellenic Centre for Marine Research, Greece, more Zenetos A., 1990: Seasonal zoobenthos, Saronikos. Hellenic Centre for Marine Research, Greece, more Zenetos A., 1991: Kalamitsi dataset. Hellenic Centre for Marine Research, Greece, more Zettler M. L., 2005: Macrozoobenthos baltic sea (1980-2005) as part of the IOW-Monitoring. Institut für Ostseeforschung Warnemünde, Germany, more KMFRI literature records, more
GIS maps [show]
Flanders Marine Institute; Renard Centre of Marine Geology - Ugent (2019). Global contourite distribution database, version 3. Available online at https://www.marineregions.org, more

A1 Publications (3) [show]
Paragkamian, S.; Sarafidou, G.; Mavraki, D.; Pavloudi, C.; Beja, J.; Eliezer, M.; Lipizer, M.; Boicenco, L.; Vandepitte, L.; Perez Perez, R.; Zafeiropoulos, H.; Arvanitidis, C.; Pafilis, E.; Gerovasileiou, V. (2022). Automating the curation process of historical literature on marine biodiversity using text mining: The DECO Workflow. Front. Mar. Sci. 9: 940844. https://dx.doi.org/10.3389/fmars.2022.940844, more Beja, J.; Vandepitte, L.; Perez Perez, R.; Poffyn, G.; Lear, D.; Gerovasileiou, V.; Herman, P.; Vanhoorne, B.; Tyberghein, L. (2021). 10 years of EMODnet Biology: past, present & future, in: Fichaut, M. et al. IMDIS 2021 International Conference on Marine Data and Information Systems 12-14 April, 2021 Online: Book of Abstracts. Bollettino di Geofisica Teorica ed Applicata: an International Journal of Earth Sciences, 62(Suppl. 1): pp. 89-90, more Gerovasileiou, V.; Nikolopoulou, S.; Mavraki, D.; Arvanitidis, C.; Vandepitte, L.; Poffyn, G.; Beja, J.; Perez Perez, R.; Boicenco, L.; Lipizer, M.; Eliezer, M. (2021). Mobilizing historical marine data within EMODnet Biology, in: Fichaut, M. et al. IMDIS 2021 International Conference on Marine Data and Information Systems 12-14 April, 2021 Online: Book of Abstracts. Bollettino di Geofisica Teorica ed Applicata: an International Journal of Earth Sciences, 62(Suppl. 1): pp. 74-75, more
Peer reviewed publications (5) [show]
Perez Perez, R.; Vandepitte, L.; Radermecker, C.; Delgat, L.; Beja, J.; Yperman, H.; Dumon, D.; Vanhoorne, B.; Tyberghein, L. (2024). The European Ocean Biodiversity Information System (EurOBIS) celebrates its 20th Anniversary: Where did It start, and what have we learned? Biodiversity Information Science and Standards 8: e135473. https://dx.doi.org/10.3897/biss.8.135473, more Gan, Y.-M.; Perez Perez, R.; Provoost, P.; Benson, A.; Peralta Brichtova, A.C.; Lawrence, E.; Nicholls, J.; Konjarla, J.; Sarafidou, G.; Saeedi, H.; Lear, D.; Penzlin, A.; Wambiji, N.; Appeltans, W. (2023). Promoting high-quality data in OBIS: Insights from the OBIS Data Quality Assessment and Enhancement Project Team. Biodiversity Information Science and Standards 7: e112018. https://dx.doi.org/10.3897/biss.7.112018, more Perez Perez, R.; Beja, J.; Vandepitte, L.; Lipizer, M.; Weigel, B.; Vanhoorne, B. (2023). EMODnet Biology: Unlocking European marine biodiversity data. Biodiversity Information Science and Standards 7: e112147. https://dx.doi.org/10.3897/biss.7.112147, more Decruw, C.; Vandepitte, L.; Perez Perez, R.; Marquez, L.; Portier, M.; Vanhoorne, B.; Tyberghein, L. (2022). An algorithmic approach to reducing taxonomic detail from actual datasets to their metadata representation to increase findabilty. Biodiversity Information Science and Standards 6: e94603. https://dx.doi.org/10.3897/biss.6.94603, more Martin-Cabrera, P.; Perez Perez, R.; Irrison, J.-O.; Lombard, F.; Möller, K.O.; Rühl, S.; Creach, V.; Lindh, M.; Stemmann, L.; Schepers, L. (2022). Establishing plankton imagery dataflows towards international biodiversity data aggregators. Biodiversity Information Science and Standards 6: e94196. https://dx.doi.org/10.3897/biss.6.94196, more
Theses (2) [show]
Pérez Pérez, R. (2018). Quantification of sea turtle nesting activity on an island with limited effort: the case of São Tomé Island. MSc Thesis. University of Algarve, Faculty of Sciences and Technology, Centre for Marine Sciences (CCMAR): Algarve. 39 pp., more Pérez Pérez, R. (2015). Estudio de la comunidad de macroinvertebrados en humedales del Alto Guadalquivir. BSc Thesis. Universidad de Jaén, Facultad de Ciencias Experimentales: Jaén. 46 pp., more
Abstracts (5) [show]
Karvinen, V.; Beja, J.; Vandepitte, L.; Pérez Pérez, R.; Vanhoorne, B.; Duncan, G.; Lillis, H.; Lear, D. (2025). Linking species and habitat observations: Cross-thematic integration in EMODnet for context-enriched marine biodiversity data, in: Living Data 2025: Unified information driving transformation = Datos Vivos 2025: Información que unida transforma, Bogotá, Colombia, 21-24 October, 2025. pp. 263, more Pérez Pérez, R.; Radermecker, C.; Delgat, L.; Beja, J.; Vandepitte, L. (2025). EurOBIS & EMODnet Biology as two of the driving forces behind marine biodiversity data capacity building within Europe, in: Living Data 2025: Unified information driving transformation = Datos Vivos 2025: Información que unida transforma, Bogotá, Colombia, 21-24 October, 2025. pp. 185, more Beja, J.; Vandepitte, L.; Perez Perez, R.; Weigel, B.; Lipizer, M.; Vanhoorne, B.; Tyberghein, L. (2024). EMODnet Biology: an EU service for the marine biology community and beyond, in: Simoncelli, S. et al. International Conference on Marine Data and Information Systems: Proceedings Volume, IMDIS 2024 Bergen (Norway) 27-29 May 2024. Miscellanea INGV, 80: pp. 200-201, more Perez Perez, R.; Vanhoorne, B.; Delgat, L.; Beja, J.; Vandepitte, L. (2024). A comprehensive approach to marine biodiversity data validation: The Biocheck Tool, in: Simoncelli, S. et al. International Conference on Marine Data and Information Systems: Proceedings Volume, IMDIS 2024 Bergen (Norway) 27-29 May 2024. Miscellanea INGV, 80: pp. 268-269, more Perez Perez, R.; Vandepitte, L.; Beja, J.; Vanhoorne, B.; Leclercq, F.; Tyberghein, L. (2022). The European Ocean Biodiversity Information System (EurOBIS): your gateway to quality controlled marine biodiversity data, in: 55th European Marine Biology Symposium 19 – 23 September 2022 Gdańsk, Poland: Book of abstracts. pp. 38, more
Report [show]
Martin-Cabrera, P.; Perez Perez, R.; Irisson, J.-O.; Lombard, F.; Möller, K.O.; Rühl, S.; Creach, V.; Lindh, M.; Stemmann, L.; Schepers, L. (2022). Best practices and recommendations for plankton imaging data management: ensuring effective data flow towards international data infrastructures. Version 1. Flanders Marine Institute: Ostend. 31 pp. https://dx.doi.org/10.25607/OBP-1742, more
Other publication [show]
Kürzel, K.; Uhlir, C.; Perez Perez, R.; Beja, J.; Vandepitte, L.; Brix, S.; Lörz, A-N. (2020). Making northern Peracarida (Crustacea) visible through OBIS (Ocean Biogeographic Information System). Centrum für Naturkunde (CeNak), Universität Hamburg/Senckenberg am Meer Institut/Vlaams Instituut voor de Zee (VLIZ): Hamburg. 1 Poster pp., more