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KaryoCode: Metadata for single cell transcriptomes of marine interstitial ciliates
Citation
Seah, B.K.B.; Singh, A.; Swart, E.; Max Planck Institute for Biology, Tübingen: Germany; (2022): KaryoCode: Metadata for single cell transcriptomes of marine interstitial ciliates. https://marineinfo.org/id/dataset/8054
Contact: Seah, Brandon ;

Archived data
Availability: Creative Commons License This dataset is licensed under a Creative Commons Attribution 4.0 International License.

Description
Single cell transcriptome sequencing libraries for marine interstitial ciliates collected from Roscoff, France in September 2021. This entry comprises metadata associated with each biological sample; the actual sequence data are deposited in the European Nucleotide Archive under project accession PRJEB50648. Metadata terms are taken from MIxS: https://genomicsstandardsconsortium.github.io/mixs/.

Scope
Themes:
Biology
Keywords:
Marine/Coastal, Interstitial ciliates, Meiofauna, Sediments, Transcriptome, ANE, France, Brittany, Roscoff, Anigsteinia Isquith, 1968, Haptorida, Hypotrichia, Kentrophoros Sauerbrey, 1928, Remanella Foissner, 1996, Trachelocercidae Kent, 1881

Geographical coverage
ANE, France, Brittany, Roscoff [Marine Regions]

Taxonomic coverage
Anigsteinia Isquith, 1968 [WoRMS]
Haptorida [WoRMS]
Hypotrichia [WoRMS]
Kentrophoros Sauerbrey, 1928 [WoRMS]
Remanella Foissner, 1996 [WoRMS]
Trachelocercidae Kent, 1881 [WoRMS]

Contributors
Max Planck Institute for Biology, moredata creator

Project
ASSEMBLE+: Association of European Marine Biological Laboratories Expanded, more

Publication
Based on this dataset
Seah, B.K.B.; Singh, A.; Swart, E.C. (2022). Karyorelict ciliates use an ambiguous genetic code with context-dependent stop/sense codons. Peer Community Journal 2: e42. https://dx.doi.org/10.24072/pcjournal.141, more


Dataset status: Completed
Data type: Metadata
Data origin: Research: field survey
Metadatarecord created: 2022-04-14
Information last updated: 2022-04-14
All data in the Integrated Marine Information System (IMIS) is subject to the VLIZ privacy policy