Skip to main content

IMIS

A new integrated search interface will become available in the next phase of marineinfo.org.
For the time being, please use IMIS to search available data

 

[ report an error in this record ] Print this page

PROBIO: LC-MS data of 50 North Sea species with potential bioactive compounds
Citable as data publication
Goeminne, G.; Bicalho, K.; Vandersyppe, S.; Desmet, S.; Metabolomics Core Ghent, Flanders Institute for Biotechnology (VIB-MCG): Belgium; (2022): PROBIO: LC-MS data of 50 North Sea species with potential bioactive compounds. Marine Data Archive. https://doi.org/10.14284/582

Availability: Creative Commons License This dataset is licensed under a Creative Commons Attribution 4.0 International License.

Description
PROBIO project dataset: LC-MS data of 50 North Sea species with potential bioactive compounds. more

In the framework of the PROBIO project, which provides a knowledge base on bioactive compounds from marine organisms present in the Belgian Part of the North Sea, fifty North Sea species containing possibly bioactive compounds with commercial potential were identified and collected for screening. A high-throughput screening of extracted compounds was performed and an open-source comprehensive database was created, combining structural, (analytical) mass spectral, biological activity information of the compounds. This dataset contains the data of the LC-MS screening, which was performed by the Metabolomics Core Ghent (MCG) of the Flanders Institute for Biotechnology (VIB). JSON data files can be opened in Phantasus: https://artyomovlab.wustl.edu/phantasus/

Scope
Themes:
Biology
Keywords:
Analytical techniques, Belgium, Bioactivity, Chromatography, Fingerprinting, Marine organisms, Mass spectrometry, North sea, Belgian part of the North Sea

Geographical coverage
Belgian part of the North Sea [Marine Regions]

Temporal coverage
3 March 2020 - 21 April 2021
Seasonally

Parameters
Compounds
Mass to charge ratio (m/z)
Species identification

Contributors
Flanders Institute for Biotechnology; Metabolomics Core Ghent (MCG), moredata creator

Related datasets
Other relation:
PROBIO: GC-MS data of 50 North Sea species with potential bioactive compounds, more

Project
PROBIO: PROspection for BIOactive compounds in the North Sea, more

Publication
Describing this dataset
De Raedemaecker, F. et al. (2022). Final report. D5.1. PROspection for BIOactive compounds in the North Sea. D 5.1. Flanders Marine Institute (VLIZ): Oostende. , more


Dataset status: Completed
Data type: Data
Data origin: Research: lab experiment
Metadatarecord created: 2022-10-26
Information last updated: 2022-12-13
All data in the Integrated Marine Information System (IMIS) is subject to the VLIZ privacy policy