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Oxford Nanopore dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics Citable as data publication Doorenspleet, K.; Mailli, A.A.; van der Hoorn, B.; Beentjes, K.; De Backer, A.; Derycke, S.; Murk, A.; Reiss, H.; Nijland, R.; Wageningen University and Research; Nord University; Naturalis Biodiversity Center; ILVO Marine Research; (2024): Oxford Nanopore dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics. Marine Data Archive. https://doi.org/10.14284/683 Contact: Doorenspleet, Karlijn ; Mailli, Amalia Availability:  This dataset is licensed under a Creative Commons Attribution 4.0 International License.Description The Oxford Nanopore metabarcoding dataset for the manuscript: Advancing molecular macrobenthos biodiversity monitoring: a comparison between Oxford Nanopore and Illumina based metabarcoding and metagenomics. more For this manuscript 3 datasets are available that all analyze 12 Bulk samples of macrobenthos from the Belgian North Sea. These samples were used: 1. For NovaSeq shotgun metagenomics 2. For Nanopore metabarc oding of amplicons from a COI region 3. For Illumina MiSeq metabarcoding of amplicons from the exact same COI region. This is the data for from the Oxford Nanopore run. Scope Themes: Biology > Benthos > Macrobenthos, Biology > Ecology - biodiversity Keywords: Marine/Coastal, DNA, Illumina sequencing, Metabarcoding, Metagenomics, Nanopore sequencing, ANE, Belgium Geographical coverage ANE, Belgium [Marine Regions] Temporal coverage October 2017 Parameters Count Species composition Species richness Contributors Related datasets Other relations: Illumina MiSeq dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics, more Illumina Novaseq dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics, more Dataset status: Completed Data type: Data Data origin: Research: lab experiment Metadatarecord created: 2024-09-26 Information last updated: 2024-09-26 | ||||
