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The microbial ecology of Antarctic sponges
Yang, Q.; Downey, R.; Stark, J.S.; Johnstone, G.J.; Mitchell, J.G. (2025). The microbial ecology of Antarctic sponges. Microb. Ecol. 88(1): 44. https://dx.doi.org/10.1007/s00248-025-02543-y
In: Microbial Ecology. Springer: New York,. ISSN 0095-3628; e-ISSN 1432-184X, more
Peer reviewed article  

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Keyword
    Marine/Coastal
Author keywords
    Antarctic sponges · Microbiome · Symbiosis · Holobiont resilience · Polar benthic ecosystems

Authors  Top 
  • Yang, Q.
  • Downey, R.
  • Stark, J.S.
  • Johnstone, G.J.
  • Mitchell, J.G.

Abstract
    Microbial communities in Antarctic marine sponges have distinct taxonomic and functional profiles due to low temperatures, seasonal days and nights, and geographic isolation. These sponge holobionts contribute to nutrient cycling, structural habitat formation, and benthic ecosystem resilience. We review Antarctic sponge holobiont knowledge, integrating culture-based and molecular data across environmental and taxonomic gradients. Although microbiome data exist for only a fraction of the region’s 593 known sponge species, these hosts support diverse symbionts spanning at least 63 bacterial, 5 archaeal, and 6 fungal phyla, highlighting the complexity and ecological significance of these understudied polar microbiomes. A conserved core microbiome, dominated by Proteobacteria, Bacteroidetes, Nitrospinae, and Planctomycetes, occurs across Antarctic sponges, alongside taxa shaped by host identity, depth, and environment. Metagenomic data indicate microbial nitrogen cycling, chemoautotrophic carbon fixation, and stress tolerance. Despite these advances, major knowledge gaps remain, particularly in deep-sea and sub-Antarctic regions, along with challenges in taxonomy, methodological biases, and limited functional insights. We identify key research priorities, including developing standardised methodologies, expanded sampling across ecological and depth gradients, and integrating multi-omics with environmental and host metadata. Antarctic sponge holobionts provide a tractable model for investigating microbial symbiosis, functional adaptation, and ecosystem processes in one of Earth’s most rapidly changing marine environments.

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